Description | Coiled-coil domain-containing protein 47 |
Sequence | MQEIDKNFINSVGSIVQNIKSIQSSISEVLAKLQMVEQPSLLNSFRVISSQFNSVLQLLRSDRASHFKNYVFLPIRLSVEVDADLEAATENRLHAWTHAVVPDYLRTKPDPQVEQKDQQISNQVQQRICNPESLLKQVTAFNRCLNCILDSLNASIRDSEMDGRKTSKTSDSEDTALLVAAILKGQNVKPAYSATPTSSRGSSGDSGHSKSSKAPKCSIEINQFTIKRQEKVRRKVCIWMFFLSCLFELVELSVKQVSQIDDNEFAEFEEFDVELDASVDADFMENNVNERETPPVDTASIGAKRSPANAEQKRNDAPNNNFNDDDYGIVEDESVDDFSHLLDENEFENFPDERKPGKQNAGPSKPVTQLKITDVPGHLRNNWNNFVVELFLIFGLIVYVMNYIYGKTKNHSLAVAWFDSNRPFLEENFSIVGDDGISPEVTKNVLIKESDNHYIVWCSGRQGCIGMEIHLKLIKRQDLLSLIFYIIRPKFDIIEIKIILNPEEMDPFVFALGTKRSAIKNAKEIMDLNLYCSEKKNVEKLGLPSSYVLHSEIGEVTTGLLDSKMVSALCKYKDVVDYIHISDQFVGIKPIEMENMAKPPETAKVVMICLNIPGQLRATEEDVCTLQPLMIFIFHVLEKVRRFRLTREGKQKADKNRQYVEESFLKTTHAQRQEAAQQRREERARERKERLMAEEDPERQRKLEKQELKRELKKKQPRVKQIKIKAM |
Length | 727 |
Position | Head |
Organism | Trichinella zimbabwensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia> Trichinellida> Trichinellidae> Trichinella. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.486 |
Instability index | 44.80 |
Isoelectric point | 6.04 |
Molecular weight | 83189.93 |
Publications |
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW mediator complex GO:0016592 IEA:InterPro rough endoplasmic reticulum membrane GO:0030867 IEA:UniProtKB-SubCell |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06278 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.74| 18| 25| 433| 451| 1 --------------------------------------------------------------------------- 433- 451 (27.32/25.25) GDDG.ISPEVTKNvLIKESD 460- 478 (28.42/20.47) GRQGcIGMEIHLK.LIKRQD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 162.70| 54| 60| 264| 323| 2 --------------------------------------------------------------------------- 264- 323 (73.53/63.99) EFAEFEEFDVElDAS..VDADFMENNVNEREtPPVDTAsiGAKRsPAnAEQKRNDAPN...NNFN 326- 384 (89.17/52.75) DYGIVEDESVD.DFShlLDENEFENFPDERK.PGKQNA..GPSK.PV.TQLKITDVPGhlrNNWN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 76.58| 24| 25| 650| 673| 3 --------------------------------------------------------------------------- 650- 673 (38.18/21.51) KQKADKNRQYVEESFLKTTHAQRQ 677- 700 (38.40/21.67) QQRREERARERKERLMAEEDPERQ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ERLMA 2) LKRELKKKQPRVKQIKIKAM | 689 708 | 693 727 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab