<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06264
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MKNLRFYPFIIMSLSLSDFETKVKNLFKEHAKSGIAYFFFRPYLMTSSEECEKKIITFTANELVEIFTSVPQNLQESAFSIVISHRVLSNSANKIVDFFVRDVTQRQILSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKGVRDTLKRLLDIPIPVHLQVDQRKSVEAVEKLIKTICDRKNNLLPAYFVITEIIKNLPEQRCFSHWRMADCFTEIIESFRPLAQLNSVCGRTFMTPIPGHVGFYFNAFWKLEALSLRFPLKGLLPYSQDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSVEEFAVILDLYRLLYTGRDIFTVSGSDSSCVLMLAPTCIWIHILKKSPSMEVELPPTVNTQRKFLQEALKNKTQFNTDNYMVAVLCNAYSSTSEIFQQDLLPILLENLDNARGHNSTQASGNFASNATTNSMPYQNGTVSEVKLRPLKLEFLDSVSVHVRMNIANSLIGTFGRFMQGKSAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMLERTLLLQFQWYPHYEIFQAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISSNSDSCFIEGVYRELLNKLPSYSWPQSTLSVFPQVFCSHYTQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQPQPQQLNIVGSSQQQQQQQQQQQQQQQQQQQSHFLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGQVTDRGPWVPDLNYYAALVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVSSWKYEDLICDFFYHVKYMYVGDSVRQETDRIIPMLRTSLQQKLRYISFAQGEQSGTPFSACPTPDILRPVHICRRSWYSFGIAVFQKLWKVEFHSYFYTHRNDQSDKIVGNSDGCMASTIAHIWRNGAAFLARGDQTGRSGNDIFSLLSSFVSIFWHRGSGYGYCWCFQILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLVLGDLSGLCWLLYVVFLIAVSISRTYISAHFPDQVILGIVVGICIALVTRSLVGHRRRRWSNLIAFMIALLLIALSVHEAHRFLGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISIAMLLANKSMHTNNNNNNITSKPFSSKFTQALLGVGLNQLVALIPIGRLPIALFYAVLLPIVSICCFVVNMVLDLDNFRVEKGGNVQAVRISQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLCSKEIGEKIKRKEPVHGDSTLPDSLTDKLQKVTVDQIRALSVSQIKQLRLLIDHEMEKSDKLVENLEAVRFKALSQIGNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGIMVDGYDSERGCSVAGSRGYFLKGPLVFLEQALIQLAMHMLYKKKYTPLYTPFFMRKEVMQEVAQLSDFDDQLYKVIGKSSEVKEDIAEEEKYLIATSEQPIAAYHRDEWISKESLPLRYIGFSTCFRQEVGSHGRDTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMILNAEMFYQTLNIPYRVVSIVSGELNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYEFVHMLNGTMCATTRTICAILENFQEENGIVVPEALRPYMPDDYKDFIPFVKAAPKVDQQAAKRGNKSATEKSTH |
Length | 2272 |
Position | Tail |
Organism | Trichinella zimbabwensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.11 |
Grand average of hydropathy | -0.104 |
Instability index | 46.16 |
Isoelectric point | 7.12 |
Molecular weight | 261601.24 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW
serine-tRNA ligase activity GO:0004828 IEA:UniProtKB-EC
|
GO - Biological Process | seryl-tRNA aminoacylation GO:0006434 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06264
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.86| 21| 41| 755| 793| 1
---------------------------------------------------------------------------
771- 791 (46.42/34.56) TQQQQQQQQQQQQQQQQQQQ.....Q
814- 839 (39.44/11.25) SQQQQQQQQQQQQQQQQQQQshfllK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 212.35| 66| 80| 1393| 1472| 2
---------------------------------------------------------------------------
1402- 1472 (107.49/94.90) SLQQKLRYI.....SF.AQGEQSGTpfSACPTPDILRP.VHIC..RRSWYSFgIAVFQKLwkVEFHSYFYTHRNDQSDKI
1479- 1553 (104.86/58.14) CMASTIAHIwrngaAFlARGDQTGR..SGNDIFSLLSSfVSIFwhRGSGYGY.CWCFQIL..LDDRPYWWVHTAGVSGQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 110.81| 33| 80| 952| 987| 3
---------------------------------------------------------------------------
952- 987 (51.97/43.04) YEGNDAFYALLIVMLLVQRseeLRSAVADCVAMLPS
1033- 1065 (58.84/40.40) YFGTRCLQMLPVVDLLLQK...LVESPAACLKFLDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.72| 15| 80| 284| 298| 4
---------------------------------------------------------------------------
284- 298 (28.85/20.51) RLLTHVFMHYTYRDA
366- 380 (28.86/20.53) KILHTKLTHYPYRYA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 104.80| 29| 63| 1179| 1207| 5
---------------------------------------------------------------------------
1179- 1207 (49.50/30.00) NNF..QTHALYCI.CIELM..SLSVSVVDVGNAL
1215- 1243 (18.14/ 6.23) HSLvdKNTVMYWVnAIGLIfsALPISYME.....
1245- 1269 (37.17/20.65) ..F..YQTILTTL.CSDHM..N.SMN.TDVSNKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 161.63| 53| 64| 1704| 1758| 7
---------------------------------------------------------------------------
1704- 1758 (82.64/59.70) PLASFFRDVGVLISIAMLLANKSMHTNN....NNNNITSKPFSSKftQALLGVGL.NQLV
1767- 1824 (78.98/50.46) PIALFYAVLLPIVSICCFVVNMVLDLDNfrveKGGNVQAVRISQQ..KRFQSVDLvDQVV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.10| 35| 85| 129| 165| 8
---------------------------------------------------------------------------
129- 165 (62.05/40.63) C..GW..NDTFAFFMEniSLLDYKGVRDTLKRLLDIPIPVH
210- 248 (58.05/32.52) CfsHWrmADCFTEIIE..SFRPLAQLNSVCGRTFMTPIPGH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.09| 22| 659| 1354| 1382| 10
---------------------------------------------------------------------------
1354- 1382 (36.85/43.71) QMLYNVdcevsswKYEDLICDFFYHVKYM
2000- 2021 (43.25/29.63) HMLYKK.......KYTPLYTPFFMRKEVM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 175.19| 54| 872| 424| 480| 15
---------------------------------------------------------------------------
424- 480 (88.45/66.97) SGSDSSCVLMLAPTCIWI.HILKKSPSMEV..ELPPTVntQRkFLQEALKNKTQFNTDNY
1297- 1353 (86.74/55.19) SASGYLQLLPQALRSTWIpHVRSEGQFLYVchLVAPFL..QR.FYQERTKFTMDITTDLY
---------------------------------------------------------------------------
|