<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06263
Description |
"Serine--tRNA ligase, cytoplasmic" |
Sequence | MKNLRFYPFIIMSLSLSDFETKVKNLFKEHAKSGIAYFFFRPYLMTSSEECEKKIITFTANELVEIFTSVPQNLQESAFSIVISHRVLSNSANKIVDFFVRDVTQRQILSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSGKSAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISSNSDSCFIEGVYRELLNKLPSYSWPQSTLSVFPQVFCSHYTQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQPQPQQLNIVGSSQQQQQQQQQQQQQQQQQQQSHFLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGQVTDRGPWVPDLNYYAALVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVSSWKYEDLICDFFYHVKYMYVGDSVRQETDRIIPMLRTSLQQKLRYISFAQGEQSGTPFSACPTPDILRPVHICRRSWYSFGIAVFQKLWKVEFHSYFYTHRNDQSDKIVGNSDGCMASTIAHIWRNGAAFLARGDQTGRSGNDIFSLLSSFVSIFWHRGSGYGYCWCFQILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLVLGDLSGLCWLLYVVFLIAVSISRTYISAHFPDQVILGIVVGICIALVTRSLVGHRRRRWSNLIAFMIALLLIALSVHEAHRFLGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISIAMLLANKSMHTNNNNNNITSKPFSSKFTQALLGVGLNQLVALIPIGRLPIALFYAVLLPIVSICCFVVNMVLDLDNFRVEKGGNVQAVRISQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLCSKEIGEKIKRKEPVHGDSTLPDSLTDKLQKVTVDQIRALSVSQIKQLRLLIDHEMEKSDKLVENLEAVRFKALSQIGNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGIMVDGYDSERGCSVAGSRGYFLKGPLVFLEQALIQLAMHMLYKKKYTPLYTPFFMRKEVMQEVAQLSDFDDQLYKVIGKSSEVKEDIAEEEKYLIATSEQPIAAYHRDEWISKESLPLRYIGFSTCFRQEVGSHGRDTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMILNAEMFYQTLNIPYRVVSIVSGELNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYEFVHMLNGTMCATTRTICAILENFQEENGIVVPEALRPYMPDDYKDFIPFVKAAPKVDQQAAKRGNKSATEKSTH |
Length | 1928 |
Position | Tail |
Organism | Trichinella zimbabwensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.11 |
Grand average of hydropathy | -0.118 |
Instability index | 47.18 |
Isoelectric point | 6.86 |
Molecular weight | 222122.93 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW
serine-tRNA ligase activity GO:0004828 IEA:UniProtKB-EC
|
GO - Biological Process | seryl-tRNA aminoacylation GO:0006434 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06263
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.86| 21| 41| 411| 449| 1
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427- 447 (46.42/37.80) TQQQQQQQQQQQQQQQQQQQ.....Q
470- 495 (39.44/12.33) SQQQQQQQQQQQQQQQQQQQshfllK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.83| 18| 49| 1249| 1268| 2
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1258- 1302 (16.22/ 9.92) CWLLYVVFLIAvsisrtyisahfpdqvilgivvgiciaLVTRSLV
1308- 1325 (30.61/14.00) RWSNLIAFMIA...........................LLLIALS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 320.95| 77| 80| 1049| 1128| 3
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970- 1047 (96.25/55.32) IPHVRS..EGQFLYVchlvaPF.LQRfYQERTKFTMDITTDLYQM.LYNvdC..EVSSWKYEDLICDFFYHVKYM.YVGDSVRQE....
1052- 1128 (137.04/91.32) IPMLRTSLQQKLRYI.....SF.AQG.EQSGTPFSACPTPDILRP.VHI..C..RRSWYSFGIAVFQKLWKVEFHSYFYTHRNDQSDKI
1135- 1209 (87.66/52.11) ......CMASTIAHIwrngaAFlARG.DQTGR..SGNDIFSLLSSfVSI..FwhRGSGYGY.CWCFQIL..LDDRPYWWVHTAGVSGQL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 151.53| 43| 57| 637| 681| 4
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637- 681 (74.52/45.29) CVAMLPSDYWHCQDWNDKYQAYqLKHAERTWSqVHTELSRASLTP
694- 736 (77.02/39.37) CLQMLPVVDLLLQKLVESPAAC.LKFLDSTLS.ILGPLYRFHPYP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 92.18| 21| 57| 151| 171| 5
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151- 171 (38.73/24.99) LNPQM.RLLTHVFMHYTYRDAI
210- 231 (27.80/15.72) LNPQAwRIISTQIIYLTLQQSI
232- 252 (25.65/13.90) CFTRLvKILHTKLTHYPYRYA.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.85| 27| 31| 60| 88| 6
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60- 88 (40.27/33.66) ANELVEIFtsVPQNLQESAFSI.VISHRVL
92- 119 (42.58/28.64) ANKIVDFF..VRDVTQRQILSIkCICEKLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.72| 16| 31| 287| 303| 8
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287- 303 (25.66/19.45) CRMLtYADLEILGLKQF
317- 332 (34.06/21.41) CEMM.YICCEILNYRLF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.13| 14| 33| 898| 913| 9
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898- 913 (23.43/18.88) MEPFYQTILTTLCsdH
934- 947 (28.70/16.27) MEDCYPARILALC..H
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