Description | "Serine--tRNA ligase, cytoplasmic" |
Sequence | MSVSLSDFEAKVKNLFKEHAKSGIAHFFFRPYLITSSEECEKEIVISTANELMEIFTSLPQNLQESAFSIVISHRVLSNSANKIVDFFVRNVIQRQMLSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSGKSAWPSPALVETYCRMLTYPDLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMYRYYYYYYYYYFAPFARLLNSFVAVAADGTKQSIAENEELMRIIILTLARSTVISSKVLGPRKVLVHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQIKHAERTWSQVYVELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVESPAIKQKLALAVHGACVPSRDDHWLLSAEFVGWVGQATDRGPWVPDLNYYGALVRRLIDTFSEPRQQWSRKTDLRFVEFNNFQTHALYSICIELMSLPVGVVDVGNALVTLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDNMNSINTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSTSGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVGNWKYEDLICDFFYHVKYMYVGDSVRQDTDRIIPMLRPSLQQKLRYISFAQGEQSAGTPFSEMINPIKLLGIQMVVWLQRLPIFGETAQHFWLAVTKLGDPVMTFSLYFPALFPFFGTAALDMAIVGAFSEISNCILKWILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLVLGDLCGICWLLYVVFLIAVSISRTYISAHFPDQVILGIVVGICIALVTRSLVGHRRRRWSNLIAFMIALLLIALSVHEVHRFFGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISVAILLANKSMFTNNNKIASKFFSTKFAQALLGVGLNQLVAFIPIGRLPTALFYAVLLPALIVLLLTMVLDLDNFRVEKGGNVQAVRVSQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLCSKEIGEKIKRKEPVDGNSTLPDSLTDKLQKLTVDQIRALSVGQIKQLRLLIDHEMEKSYKLVENLEAVRFKALSQIGNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGIMVDGYDSERGCSVAGSRGYFLKGPLVFLEQALIQLAMHMLFKKKYTPLYTPFFMRKEVMQEVAQLSDFDDQLYKVIGKSSEVKEEIAEEEKYLIATSEQPIAAYHRDEWISKESLPLRYVGFSTCFRQEVGSHGRDTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMISNAEVFYQTLNIPYRVVSIVSGELNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYGQTKKMMAKAEFVHMLNGTMCATTRTICAILENFQEENGIAVPEALRQYMPDDYKDFIPFVKPAPKVEQAAKRGGNKSAAAEKSTQ |
Length | 1762 |
Position | Tail |
Organism | Trichinella britovi (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia> Trichinellida> Trichinellidae> Trichinella. |
Aromaticity | 0.12 |
Grand average of hydropathy | 0.021 |
Instability index | 40.32 |
Isoelectric point | 7.11 |
Molecular weight | 202444.23 |
Publications |
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW serine-tRNA ligase activity GO:0004828 IEA:UniProtKB-EC |
GO - Biological Process | seryl-tRNA aminoacylation GO:0006434 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06221 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 155.41| 47| 80| 454| 503| 1 --------------------------------------------------------------------------- 454- 503 (77.00/65.42) VPLERFMLT...MLLRDYEGNDAFYALLIVMLLVQRseeLRSAVADCVAMLPS 532- 581 (78.41/58.03) VELSRASLTpndCPLPVYFGTRCLQMLPVVDLLLQK...LVESPAACLKFLDS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 188.26| 52| 81| 1099| 1162| 2 --------------------------------------------------------------------------- 1099- 1152 (83.16/64.66) SRTYISAHFPDQVILGIVVGICIALVTRSLVGHRRRRWSNliAFMIALLLIALS 1184- 1219 (44.64/36.56) STTPLASFFRD...VGVLISVAILLANKSMFTNNNKIAS............... 1221- 1261 (60.46/40.88) ...FFSTKFA.QALLGVGLNQLVAFIP...IG....RLPT..ALFYAVLLPALI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 175.55| 53| 81| 103| 159| 3 --------------------------------------------------------------------------- 103- 159 (91.14/76.14) ICEKLLT..CAELNINSCGWNdtfaFFMENISLLDYKDL..LNPQMRLLTHVFMHYTYRDA 185- 241 (84.41/59.95) ILELMFTaeCDHSQLNPQAWR....IISTQIIYLTLQQSicFTRLVKILHTKLTHYPYRYA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 51.20| 13| 35| 756| 768| 4 --------------------------------------------------------------------------- 756- 768 (25.37/14.42) MEPFYQTILTTLC 792- 804 (25.84/14.82) MEDCYPARILALC --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 222.27| 68| 283| 674| 745| 6 --------------------------------------------------------------------------- 674- 745 (106.72/92.08) FSEPRQQ.WSRKTDL..RFVEFNNFqTHALYSIcIELMSLPVGVVDVGNALVTLVTHWHSLVDKntVMYWVNAIG 961- 1031 (115.55/81.61) FGETAQHfWLAVTKLgdPVMTFSLY.FPALFPF.FGTAALDMAIVGAFSEISNCILKWILLDDR..PYWWVHTAG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 92.45| 28| 597| 1032| 1063| 7 --------------------------------------------------------------------------- 1032- 1063 (48.87/41.51) VSGQLSH.PLKQFQ...WTcetgPGSPSGHAMVSAS 1631- 1662 (43.58/26.22) VSGELNNaAAKKYDleaWF....PGSGAFRELVSCS --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) PKVEQAAKRGGNKSAAAEKSTQ 2) YKDFIPFV | 1741 1730 | 1762 1737 |
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