<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06215
Description |
RNA polymerase II-associated protein 3 (Fragment) |
Sequence | LKFICHLCHMVLDACQSDFVPVTLTNRLCALIRCDKNSNEAPQRIEELIGELQQLRKDIRLCFRGVDCSPEEQVHRVRVLYKELLLKDRLVKHLKQISVQLVNVQVNDSQLLNEEVFKIPDLLSDNNGQKASSSNNNNGKKLSLSCPKCSCIILRENHGEQVTVEKELPELSLKADGTVDMKTFTEFVRVDDIYDFENIGFSRDSNGVQYLLCAACEIGPLGFHDLTTKLSYVASVRQCFFSGIFFSLYCSNVNLVMLVRKERKDISEKDAQKALFEKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVKALYRRGMASKGLNNFDDAVEDFQHVLTLDPNNDIAKKELEEIISKVKPAENDPLLVYPVENPDEKEYQKPLKVIIVRDAVKKSHFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNIPCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLSRTDFIYLKTVLDKAKHVCSKDQVQRWDDLFKKHIETAINKNDSEEEASVESFP |
Length | 604 |
Position | Middle |
Organism | Trichinella britovi (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.303 |
Instability index | 37.49 |
Isoelectric point | 5.96 |
Molecular weight | 68978.45 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | guanyl-nucleotide exchange factor activity GO:0005085 IEA:UniProtKB-KW
|
GO - Biological Process | protein transport GO:0015031 IEA:UniProtKB-KW
small GTPase mediated signal transduction GO:0007264 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06215
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.18| 31| 32| 285| 316| 1
---------------------------------------------------------------------------
285- 316 (52.73/37.56) YVK.KDYEKAIMCYSRSISADP.FRPVVYcNRAM
318- 350 (46.46/27.41) YLKlKNYAEAYADCSKALTFDStYVKALY.RRGM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.31| 24| 31| 27| 52| 2
---------------------------------------------------------------------------
27- 52 (37.70/28.78) RLC.ALIRCdkNSNEAPQRIEELIGEL
60- 84 (39.61/23.77) RLCfRGVDC..SPEEQVHRVRVLYKEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 208.28| 57| 315| 95| 176| 3
---------------------------------------------------------------------------
95- 151 (96.15/47.18) KQISVQLVNVQVNDSQLLNEEVFKIP.D..LLSDNNGQKASSSNNNNGKKLSL....SCPKC..SC
412- 466 (73.04/31.97) KPLKVIIVRDAVKKSH.FNSQQPALS.DesNVTKQSEQKISDYKLNASIKIT.....RIPKC....
487- 530 (39.08/45.25) ...............YILN.....IPcD..CFSNLLGEFLDGEFVANLLKAFMikvnSEPQCsiSC
---------------------------------------------------------------------------
|