<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06211
Description |
Endoplasmic reticulum-Golgi intermediate compartment protein 3 |
Sequence | MLNNIESEEEQRIRFQVELEFVQCLANPNYLNYLAQRDFFKNPAFINYLKYLLYWKRQEYAKYLKFPQCLHILELLQTEEFRTAMTRVPNSKFLEDQMLLQWQFYIRKRVRAHNGVRLPSRCETCKYLALELEARFSETGQSPENTFNGRGGTKKYRDSELRFIETMENLCDRLLDYNLHKEHKNSLRFARGQSETMKTLHGLVNRGVQVELGLPYELWDSPSVEVTRMKQDCETMLENNEEAIERWYYAKQKEPLRHYLCENRVLNSDERECLYENQADSTPHTDLMLSQVIRQMRRLDAYSKPVEDFRIRTAFGGTVTLISSVVIGILFFNELMIYLSTEIVEELLVDTTVGDARLKINFDIVFPAMACILSVDAMDASGQFQNDVTENVWKEPIHWSENNVGTTMPTVQQSKAANCGSCYGAETSEIQCCNSCDDVIKAYKRKGWALNSMDSVEQCRDREWVKKLHHSLNQGCHVYGWLEVSKVTGNFHIAPGSSVKDVHVHVHNLHQLGPSAFNTSHTIKHFSFGESFPGKKFPLDGETVIANKGERTV |
Length | 553 |
Position | Middle |
Organism | Trichinella britovi (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.491 |
Instability index | 46.42 |
Isoelectric point | 6.10 |
Molecular weight | 64197.19 |
Publications | |
Function
Annotated function |
Possible role in transport between endoplasmic reticulum and
Golgi.
ECO:0000256 ARBA:ARBA00002776
|
GO - Cellular Component | endoplasmic reticulum-Golgi intermediate compartment membrane GO:0033116 IEA:UniProtKB-SubCell
integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06211
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.19| 14| 15| 434| 448| 1
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434- 448 (23.03/22.16) NSCDDVIKAYKRKgW
451- 464 (28.16/20.68) NSMDSVEQCRDRE.W
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 73.30| 20| 20| 26| 45| 2
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26- 45 (37.66/23.76) ANPNYL..NYL...AQRDFFKNPAF
47- 66 (18.88/ 8.70) ...NYL..KYLlywKRQEYAKYLKF
89- 105 (16.77/ 7.01) PNSKFLedQML...LQWQFY.....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.54| 17| 24| 135| 158| 3
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121- 145 (23.48/29.75) RCETCKYLAleleaRFSETgqsPEN
150- 169 (28.06/12.23) RGGTKKYRD..selRFIET...MEN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.04| 10| 20| 278| 287| 4
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278- 287 (18.51/11.68) QADSTPHTDL
300- 309 (18.54/11.71) DAYSKPVEDF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.89| 13| 20| 490| 503| 5
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490- 503 (19.71/18.43) NFH.IAPgSSVKDVH
508- 521 (20.18/12.52) NLHqLGP.SAFNTSH
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