<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06207
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFGNNVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIGNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1276 |
Position | Tail |
Organism | Trichinella britovi (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.009 |
Instability index | 43.87 |
Isoelectric point | 6.30 |
Molecular weight | 144912.71 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06207
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.16| 23| 28| 424| 446| 1
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424- 446 (42.42/21.33) FTETLDLSMNLFTGKFVCRLPAF
453- 475 (42.74/21.54) FVNRIDHTMRFFTLKSCETLPAF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.08| 25| 28| 819| 846| 2
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819- 846 (40.47/31.13) LTTLPDTIFRVGSEHTSNQMLYlnrMFS
848- 872 (47.61/28.58) LPTGPDTVRLLCKDHLCLEMRF...TFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.23| 19| 90| 1137| 1156| 3
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1137- 1156 (33.65/24.33) QQHAYVESSTAYWIpEMCFL
1226- 1244 (36.58/21.18) QQTAQQSNCTVYPI.ETCLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.80| 17| 90| 698| 722| 4
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698- 715 (26.89/29.20) CLD.....DVLSGVRcFNALYEP
726- 747 (25.91/ 7.97) CLHrltplSMLSSYK.LTLVYGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.26| 18| 34| 1061| 1078| 5
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1061- 1078 (32.66/23.30) KFFLNE.SNL..SSVMFKFFR
1094- 1114 (22.60/13.61) KYFLEQiSSTynAAAMYAFVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 322.00| 101| 793| 188| 295| 9
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188- 295 (151.76/124.38) SLLTLPEGMRNfTVNNGMVTFHVAGEfEAQLTLLGQLPRTPWTLLNLRILVSDP...RVTDGSDILSSLQLSFLHHLIQS..RLNVSKEPiVELYRVIHcfclSAQLDILCCQ
952- 1057 (170.24/112.39) SSMVLENSMRT.STQNRLIGNSLAND.DGHAEPSSRSPPEDWTPCVVPIEIQQNafiRICSPSGTHPHPEWSHLQKFILSveVLEKMKEQ.ANNFTVIR....PGQLSLKCNQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 233.15| 74| 246| 318| 405| 11
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318- 403 (114.94/118.42) KLVLSYWK.EQNQGGVASFKVIFWI.NQDEPFAplqvthipkseLKLPSMDTESGQLSLDNLLTETVLIRVKHrLQQLCDF.LRTIKGL
565- 641 (118.21/84.14) QLCLFSWKiQKKQCVIPELMAAFSMcENAMPFF...........LLMEEMERTSARYAYHQLFDGTVVLRVLG.IDQTYDRnLEKIFGL
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