<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06204
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFDEDISLIAQLTEKLDDSHWNCLEDLLHQIRVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIGNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1303 |
Position | Tail |
Organism | Trichinella britovi (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.015 |
Instability index | 44.06 |
Isoelectric point | 6.08 |
Molecular weight | 148173.34 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06204
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1051.36| 291| 310| 25| 331| 1
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25- 327 (465.35/338.08) NQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLD..................................RKIS...IAQFA...HSARQL..FVRLYAILKWARC.GA...KVDLCTGIV..CFLDQQASMFVDTADRLYQMNCDVLQ.NARLPVFQ.....IPTAVDVLTLGTYPRLPSVIKREFIRTAdISQEEEEC..VLHRLNYVIER..RLLPSLL.TLPEGM...RNFTVN.NGMVTFHVAGEFEA.QLTLLGQ....LPRTPWTLLNLRILVSDP.RVTDG.SDILSSLQLSFLHhliqsrLNVSKepIVELYRVIHCFCL.SAQLDILCCQAYRLIGDF.MSEN.....LSVEEYvssEKLVLSYWKEQ
342- 641 (377.17/251.56) NQDEPFAPLQVT...HIPKSELKLPSM.DTESGQLSLD..................................NLLTetvLIRVK...HRLQQLcdFLR...TIKGLTC.TF...ISDMPALSI..TFLPD..SSFTETLD..LSMNLFTGKfVCRLPAFDedislIAQLTEKLDDSHWNCLEDLLHQIRVRIF.VNR.......IDHTMRFFTLKscETLPAFLkTACEQWpvdRRFIIKfHRFENYYIVLTFND.HPDDSAK....VNLDFWLVCNE..TVSNAiRSADAdDDVRSKKNVNLLH......FDLRR..VVSETKVFHQLCLfSWKIQKKQCVIPELMAAFsMCENampffLLMEEM...ERTSARYAYHQ
643- 888 (208.85/131.16) .....FDGTVVLRVLGIDQTYDR..NLEKIFGLPKGLAiglscdrhrvvwsielnttgsplgdsssfgravhRKIT...ILSCTvgnESARKC.....LDDVLSGVRCfNAlyePVKALAGAYksC.LHRLTPLSMLSSYKLTLVYGPMLR.YVCHLQWK.....PSEKMYILSFGVD...NSVLNEEYVY...FNPHSILCghLQHWFNAVRDI..SALAHLLqASSAAL...QALTTL.PDTI.FRVGSEHTSnQMLYLNRmfsiLPTGPDT...VRLLCKD................................................................................................
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