<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06181
Description |
Mediator of RNA polymerase II transcription subunit 23 (Fragment) |
Sequence | MSVSLSDFEAKVKNLFKEHAKSGNAHFFFRPYLITSSEECEKEIVISTANELMEIFTSLPQNLQESAFSIVISHRVLSNSANRIVDFFVRNVTQRQMLSIKCICEKLLTCAELNINSCGWNDTFAFFVENISLLDYKDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSGKSAWPSPALVETYCRMLTYPDLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMYRYYYYYYYFAPFARLLNSFVAVAADGTKQSIAENEELMRIIILTLARSTVISSKVLGPRKVLVHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQIKHAERTWSQVYVELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVESPAIKQKLALAVHGACVPSRDDHWLLSAEFVGWVGQATDRGPWVPDLNYYGALVRRLIDTFSEPRQQWSRKTDLRFVEFNNFQTHALYSICIELMSLPVGVVDVGNALVTLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSINTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVGNWKYEDLICDFFYHVKYMYVGDSVRQDTDRIIPMLRPSLQQKLRYISFAQGEQSAGTPFSEMINPIKLLGIQMVVWLQRLPIFGETAQHFWLAVTKLGDPLCFHFLAPLRWIWILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLVLGDLCGICWLLYVVFLIAVSISRTYISAHFPDQVILGIVVGICMALVTRSLVGHRRRRWSNLIAFMIALLLIALSVHEAHRFFGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISVAILLANKSMFTNNNKIASKFFSTKFAQALLGVGLNQLVALIPIGRLPTALFYAVLLPVLFTNNSNKLQ |
Length | 1242 |
Position | Tail |
Organism | Trichinella patagoniensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.13 |
Grand average of hydropathy | 0.169 |
Instability index | 42.76 |
Isoelectric point | 8.28 |
Molecular weight | 143090.04 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06181
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.85| 29| 34| 786| 819| 1
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786- 819 (44.83/35.64) RSKLMEDCYP.ARILALCHAVwlhsaSGYLQLLPQ
822- 851 (51.03/27.67) RSTWIPHVRSeGQFLYVCHLV.....APFLQRFYQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 159.35| 37| 40| 535| 571| 2
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466- 507 (25.57/ 9.15) ..Y.EGND..AFYAL.LIVMLLVQRseeLRSAVAdcVAMLPSDywhCQ.
508- 544 (45.42/21.05) ..D.WNDKyqAYQIK.HAERTWSQV...YVELSR..ASLTPND...CPL
545- 581 (60.55/30.13) PVY.FGTR..CLQML.PVVDLLLQK...LVESPA..ACLKFLD...STL
586- 614 (27.81/10.50) PLYrFHPY..PVSFLySTFRFYEKR...LVESPA...............
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 103.14| 29| 31| 958| 987| 3
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958- 987 (49.39/38.38) IFGETAQHFWLAVTKLGDPLCfHFLAPLRW
990- 1018 (53.74/36.37) ILLDDRPYWWVHTAGVSGQLS.HPLKQFQW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.97| 26| 31| 49| 77| 4
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49- 77 (38.53/32.36) ANELMEIFTslpQNL.QESAFSI.VISHRVL
81- 108 (36.44/21.84) ANRIVDFFV...RNVtQRQMLSIkCICEKLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.48| 18| 31| 196| 213| 5
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196- 213 (32.36/16.42) HSQLNPQAWRIISTQIIY
230- 247 (35.12/18.35) HTKLTHYPYRYARNQLMW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.20| 19| 31| 657| 675| 6
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657- 675 (33.48/25.30) DLNYYG..ALVRRLIDTFSEP
689- 709 (29.73/21.46) EFNNFQthALYSICIELMSLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.71| 14| 252| 641| 656| 7
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641- 656 (25.83/22.89) FVG.WVGQATDRgpWVP
895- 909 (22.88/12.32) YVGdSVRQDTDR..IIP
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