<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06154
Description |
Lysine-specific demethylase 8 |
Sequence | MILLVRIGLALLQCCFGYTWSILECFFKKPKSVTDKVIVITGAARGIGKGLALLLAHLHAKIVLVDLDESTNKQTAEELRQETSACVYAYTADVTDPESMRQVANAIVTNPELGCPDVLVCSAGVLIPKLLEDHSDVEIYRTMNTIRAFYPYILKRGQGHIVAVSSYGGHFGNSYSCCYSASKFAVRGLMESLEWEIYDHGFGGEIKTTTIYPFFTRTDLLSSCNVTSDVIPVLTPEETSQGILKAILYEQTEAFIPFYGSLICYFFKGRTFKAIELEDFEAAVEICNFMLNTGHWSEVNISWRLLYTMVSLLLSIAHIANGCLKDALCSCDKGLLLGCPISGNILARLASLLHCKMIDTYPLEDVLINDKFDQALVSMNDVCEHFEHCVPRVECPSLETFQRDFLIPQNPVVIEGALESWQAMEKWNIAYLMSKCAYRTVPIEIGSKYTNDEWSQKLLTVTDFVHEYFNPDAREKAYLAQHQLFEQITELKDDIAVPDYCCLQCAPEDVDINAWFGPANTISPLHTDPRDNLFAQVFGKKYLRLCHPTATKNLYPITDGLMSNTSQIDMEKIDYEKFPLVKNVKFYETIVKPGDLLFIPKATGIACDVMNSAGSAAVQSSLASGLLPSPSNLYYQSLGHITGGEGISRNGSRTPVSQRRVGHFTRARHHSSCDVHSLCDGVTFERCFDSQLPPADPQIHAGGFKSGFPFSARSSSNSYRQPTLSSHLSHGNLGYLQSDCDWSADLDPLVKNGRGSNEAPGCGSVSKIVNGRMTTTNCCPADCDALREDLRVAMEKLNATMGSIKSFWSPELKRERALRKEETAKMNMLQEQLKLSLVNNQKQSVLIEQLQNELRFQCNSGRSRRFPDDGPLIGHEDYRTVCQERDMYRRDWLISSDAVKELQYQLESQRQLLLSKDESVKRLLEALHSKGVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCDDLESHLQQSHDGLSSLRKDAVIESLQDEVASYEAELKRLRSGGAIHEREFTDKMVTDKEYQELKLKADKLELELGQKTVEIQALYTRLSTAEESASDFKKHLELMKESNASKDQQATLLQSDIDALRGKLESKNEMIDQKAQQITELQADKNRLLSELNLLNEQHRISEVGLSTKDRKIDLLEETIRERDCELNLIRTRLNSSPGVIQEKKLQDEINRLVQERDLWRKRFNEEHECLAIERKRDGEAHEKENKDLRIAIASLQKEISDRQVFIESQNEKINDMVRQTEALTKENSLYKELNKTNGVDLLKAEIERLNQAVDESRSEVDRLLKIIHNSEKEKNEGRESGNDSKRFHSSTENADYQSVLMHKDRRIEELEEALKESVSITAEREMAVAQQKLNSQRAEQRIAALKDELKTLQEQCDELSIQLKQLRQEKVQSDATIKTMQEERKRYVDEVMQLKGEVLLAAIEEKDAHIAFLENFHGRKSSEEIDNVKKQKEELLQRLKEENARRVKLHNDPTLNFTDHFPKVSGIDLVDDEGDVWEWKKKTTRHWWPAMGIAWYDLVYLYSDPEKSDRQDVLLDSLQTALDNMDAKQAGFFSLTSETFFSTTTTNAKPVHLFQSSEFPETTFVLVGDTLGSASTFLFAEKSITQMIRNLDGAYCTKPISKVECRGNKYVISDFTVRTSVATIASNFKGILVEIEYRPCVAMQLCGDLMKEFCTALLGSAASAPPTFVGLTKPNQRYVPIDTILQKMSVQTAGPNEQQSQAQPQPQQQQQQQPQQQQQQQQQQQQQ |
Length | 1759 |
Position | Head |
Organism | Trichinella patagoniensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.461 |
Instability index | 47.81 |
Isoelectric point | 5.44 |
Molecular weight | 199250.58 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | cytoplasm GO:0005737 IEA:UniProtKB-SubCell
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | methyltransferase activity GO:0008168 IEA:UniProtKB-KW
oxidoreductase activity GO:0016491 IEA:InterPro
transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | methylation GO:0032259 IEA:UniProtKB-KW
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06154
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 726.17| 215| 223| 973| 1195| 1
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913- 1095 (229.71/170.22) ..............................................LLSKDESVKRLLEALHSK.....GVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCD.........dleshlqQSHDGLsslrkDAVIESLQDEVASYEAELKRLRSG...GAIHERE....FTDKMVTDKEYQEL.KLKADKLELELGQKTVEIQALYTRLSTAEESASDFKKHLELMKESNasKDQQATLLQSDIDALRGKL
1096- 1285 (279.57/194.98) ESKNEmIDQKAQQITELQADKNRLLSELNLLNEQHRISEVG.....LSTKDRKIDLLEETIRER.....DCELNLIRTRLNSSPGVIQEKKLQDEINRLVQERD...LWRKRF......nEEHECL.................................AI.ERK.....RDGEAHEKENKDL.RIAIASLQKEISDRQVFIESQNEKINDMVRQTEALTKENSLYKELN..KTNGVDLLKAEIERLNQAV
1287- 1482 (216.90/144.99) ESRSE.VDRLLKIIHNSEKEKNEGRESGNDSKRFHSSTENAdyqsvLMHKDRRIEELEEALKESvsitaEREMAVAQQKLNSQRAEQRIAALKDELKTLQEQCDelsIQLKQL..rqekvQS.........DATIKTMQEERKRYVDEVMQLKGEvllAAIEEKDahiaFLENFHGRKSSEEIdNVKKQK..EELLQ..........RLK..EENARRVKLH.............................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 484.49| 161| 278| 385| 578| 2
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385- 578 (247.76/244.60) HFEHCVPRVECPSLeTFQRDF...LIPQNPVVIEGALESwqameKWNIAYLMSKCAYRTvPiEIGSKYTND.........EWSQKLltvtdfvheyfNP...DAREKAYLAQHQLFEQIteLKDDIAVPDYCCLQCAP..EDVDI.....NAWFGPANTI.SPlhtdprdnlfaQVFGKKYLRlCHPTATKNLY..PITDGLMSNTSQ.IDMEKIDYE.KF
669- 856 (236.73/159.56) HHSSCDVHSLCDGV.TFERCFdsqLPPADPQIHAGGFKS.....GFPFSARSSSNSYRQ.P.TLSSHLSHGnlgylqsdcDWSADL...........DPlvkNGRGSNEAPGCGSVSKI..VNGRMTTTNCCPADCDAlrEDLRVameklNATMGSIKSFwSP...........ELKRERALR.KEETAKMNMLqeQLKLSLVNNQKQsVLIEQLQNElRF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.46| 27| 223| 113| 139| 3
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113- 139 (49.04/32.71) LGCP...DVLVCSAGVLIPKLLEDHS..DVEI
337- 368 (40.41/25.59) LGCPisgNILARLASLLHCKMIDTYPleDVLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.99| 16| 19| 1559| 1577| 4
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1559- 1577 (19.66/20.34) AKQAGFFSlTSEtfFSTTT
1580- 1595 (30.33/17.13) AKPVHLFQ.SSE..FPETT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 178.80| 53| 435| 149| 203| 7
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149- 203 (91.64/71.99) FYPYILKRGQGHIVA.VSSYGGHFGNSYSCCYSASKFAvRGLMESlEWEIYDHGFG
586- 639 (87.16/59.39) FYETIVKPGDLLFIPkATGIACDVMNSAGSAAVQSSLA.SGLLPS.PSNLYYQSLG
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