<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06152
Description |
Lysine-specific demethylase 8 |
Sequence | MILLVRIGLALLQCCFGYTWSILECFFKKPKSVTDKVIVITGAARGIGKGLALLLAHLHAKIVLVDLDESTNKQTAEELRQETSACVYAYTADVTDPESMRQVANAIVTNPELGCPDVLVCSAGVLIPKLLEDHSDVEIYRTMNTIRAFYPYILKRGQGHIVAVSSYGGHFGNSYSCCYSASKFAVRGLMESLEWEIYDHGFGGEIKTTTIYPFFTRTDLLSSCNVTSDVIPVLTPEETSQGILKAILYEQTEAFIPFYGSLICYFFKGRTFKAIELEDFEAAVEICNFMLNTGHWSEVNISWRLLYTMVSLLLSIAHIANGCLKDALCSCDKGLLLGCPISGNILARLASLLHCKMIDTYPLEDVLINDKFDQALVSMNDVCEHFEHCVPRVECPSLETFQRDFLIPQNPVVIEGALESWQAMEKWNIAYLMSKCAYRTVPIEIGSKYTNDEWSQKLLTVTDFVHEYFNPDAREKAYLAQHQLFEQITELKDDIAVPDYCCLQCAPEDVDINAWFGPANTISPLHTDPRDNLFAQIDMEKIDYEKFPLVKNVKFYETIVKPGDLLFIPKATGIACDVMNSAGSAAVQSSLASGLLPSPSNLYYQSLGHITGGEGISRNGSRTPVSQRRVGHFTRARHHSSCDVHSLCDGVTFERCFDSQLPPADPQIHAGGFKSGFPFSARSSSNSYRQPTLSSHLSHGNLGYLQSDCDWSADLDPLVKNGRGSNEAPGCGSVSKIVNGRMTTTNCCPADCDALREDLRVAMEKLNATMGSIKSFWSPELKRERALRKEETAKMNMLQEQLKLSLVNNQKQSVLIEQLQNELRFQCNSGRSRRFPDDGPLIGHEDYRTVCQERDMYRRDWLISSDAVKELQYQLESQRQLLLSKDESVKRLLEALHSKGVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCDDLESHLQQSHDGLSSLRKDAVIESLQDEVASYEAELKRLRSGGAIHEREFTDKMVTDKEYQELKLKIDALRGKLESKNEMIDQKAQQITELQADKNRLLSELNLLNEQHRISEVGLSTKDRKIDLLEETIRERDCELNLIRTRLNSSPGVIQEKKLQVFIESQNEKINDMVRQTEALTKENSLYKELNKTNGVDLLKAEIERLNQAVDESRSEVDRLLKIIHNSEKEKNEGRESGNDSKRFHSSTENADYQSVLMHKDRRIEELEEALKESVSITAEREMAVAQQKLNSQRAEQRIAALKDELKTLQEQCDELSIQLKQLRQEKVQSDATIKTMQEERKRYVDEVMQLKGEVLLAAIEEKDAHIAFLENFHGRKSSEEIDNVKKQKEELLQRLKEENARRDDEGDVWEWKKKTTRHWWPAMGIAWYDLVYLYSDPEKSDRQDVLLDSLQTALDNMDAKQAGFFSLTSETFFSTTTTNAKPVHLFQSSEFPETTFVLVGDTLGSASTFLFAEKSITQMIRNLDGAYCTKPISKVECRGNKYVISDFTVRTSVATIASNFKGILVEIEYRPCVAMQLCGDLMKEFCTALLGSAASAPPTFVGLTKPNQRYVPIDTILQKMSVQTAGPNEQQSQAQPQPQQQQQQQPQQQQQQQQQQQQQ |
Length | 1591 |
Position | Head |
Organism | Trichinella patagoniensis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.424 |
Instability index | 48.15 |
Isoelectric point | 5.38 |
Molecular weight | 179876.98 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | cytoplasm GO:0005737 IEA:UniProtKB-SubCell
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | methyltransferase activity GO:0008168 IEA:UniProtKB-KW
oxidoreductase activity GO:0016491 IEA:InterPro
transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | methylation GO:0032259 IEA:UniProtKB-KW
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06152
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.78| 19| 19| 859| 877| 1
---------------------------------------------------------------------------
859- 877 (33.94/20.41) RDWLISSD.AVKELQYQLES
879- 898 (26.84/14.65) RQLLLSKDeSVKRLLEALHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 343.00| 87| 415| 767| 857| 2
---------------------------------------------------------------------------
769- 857 (143.08/80.98) TMGSIKSFWSPELKRERALRKEE........TAKMNML.QEQLKLSL..VNNQKQSVLIE.QLQNELRF...QCN..SGRSRRFPDDGPLigHEDY......RTVCQERDMY
907- 985 (86.95/41.95) .....QSCAEMELAQNRIVELEE...kcsrlQAHCDDL.ESHLQQSHdgLSSLRKDAVIE.SLQDEV.....ASY..EAELKRLRSGGAI..HERE......FT........
987- 1041 (48.02/17.22) KMVTDKEYQELKLKID.ALRGKL........ESKNEMIdQKAQQITE..LQADKNRLLSElNLLNE..............................................
1194- 1275 (64.96/29.52) ................RIEELEEalkesvsiTAEREMA.VAQQK.....LNSQRAEQRIA.ALKDELKTlqeQCDelSIQLKQLR.......QEKVqsdatiKTMQEERKRY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 389.70| 128| 223| 113| 287| 3
---------------------------------------------------------------------------
113- 275 (185.88/230.27) LGCP...DVLVCSAGVLIPKLLEDHS..DVEIYRTMNtiRAfypyilkrgqghIVAVSSYGGHFGNsysC................CYSASKFAVRGLMESleWEIYDHgfggeiktttiypfFTRTDLLSSC...NVTSDVIPVLTPEETSQGILKAILYEQtEAFIPfYGSLICYFFKGRTFKAI
337- 488 (203.82/157.25) LGCPisgNILARLASLLHCKMIDTYPleDVLINDKFD..QA............LVSMNDVCEHFEH...CvprvecpsletfqrdfLIPQNPVVIEGALES..WQAMEK..............WNIAYLMSKCayrTVPIEIGSKYTNDEWSQKLLTVTDFVH.EYFNP.DAREKAYLAQHQLFEQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 139.91| 33| 167| 513| 552| 4
---------------------------------------------------------------------------
513- 545 (61.34/36.25) NAWFGPANTISPLHTDP.RDNL.FAQIDME.KIDYE
686- 716 (39.86/18.75) NSYRQP..TLSS.HLS..HGNLgYLQSDCDwSADLD
739- 767 (38.71/19.25) NGRMTTTNCC.PADCDAlREDL...RVAME.KLN..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.99| 16| 19| 1391| 1409| 5
---------------------------------------------------------------------------
1391- 1409 (19.66/20.58) AKQAGFFSlTSEtfFSTTT
1412- 1427 (30.33/17.30) AKPVHLFQ.SSE..FPETT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 137.69| 39| 166| 1141| 1179| 6
---------------------------------------------------------------------------
1141- 1179 (63.05/42.78) VDESRSEVDRLLKIIHNSEK.....EKNEGRESGNDSKRFHSST
1283- 1311 (18.01/ 6.48) ....KGEV..LLAAIEEKDAhiaflENFHGRKSSE.........
1313- 1347 (56.63/37.61) IDNVKKQKEELLQRL....K.....EENARRDDEGDVWEWKKKT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.23| 17| 282| 1078| 1104| 7
---------------------------------------------------------------------------
1074- 1090 (26.24/23.59) IRTRLNSSPGVIQEKKL
1101- 1117 (26.00/ 6.08) INDMVRQTEALTKENSL
---------------------------------------------------------------------------
|