<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06115
Description |
Mediator of RNA polymerase II transcription subunit 12-like protein |
Sequence | MASCTVAWEKKPLKRPRLGQPDDELTAEKVRQGYIYKPPLLNEYESLRSQRFDENLDDYFIKLTQSYNAIVSKKAEINALQDSYKKKSGFKEPSIWHLAAKPKGQDTWFKDLSGNKPLSALGKRFPFLNKKDEILYTLAEFNVPMVRVVWFLKMTNAHIAQQQECGKMKKKHMSDPFADWTHLVMKYLRDLCSKLGEFFSLSMEVPMNSEFECHYRHWQYTTKLTRHLFEEGLLDKEMLLNGLLDIFAEKIYASSFGILKMIVPVLLQRNFVSLKFIDGFLMSVLLSRRLVYLACKVLSAMKIDNLQNDSENMKEGLLDYLNCPFHRTVLFGLSNVVHSVLIDCPTALIWNEMECEDTGENGKAYLCGSPLDLLYCSPVDLPLFVDPSTEFVKKELERLTEMVTERSRAVESHWSYNKCQLSGLSTIIQHFLSILDCLDKFKFEYVNETNNTDALYKTIFQSEKKETRVDMDSIAVQFLCHWAVSPHRYGSYRAAVVTRLFERHLQELSKKMPQVRYPFQKSLFNYLHNQAPNLGEMCSSSEIKPFMNLILLFSRLIESDIFSHDQYVSTLVSSGDLIPNGANVFYPLQNQCSSSASAVENVSNTQPAILMSNNFFSEHFKPIENVDFNYFKDSDESKLDFDRIIDFADKKAISSDADSCSLRRVPKLSKHYFNVLHFPVPQDDQYRHECNQRQLLLFGSNSDQYSRKHILKKLTKELNKLWSKKTSAELTTTGLIRVRKIIDSESLCSLSRKIQNLVFYDQFAVMDCCCDAGIAQFNSFINGQSNCLPTLENFDFLLGLLEESSNFISLVEFMEAVICLLPKLEAQIVERNFQSANSLTLQYAVCMVGYMRKHHCYFIQLESVMCNIWRSLLLYVKSKTVVNSFSAERCVWVYLHDLYQCCSYIRSLHADLYLNSRDCIQRCLCVETKPSSCNDLRSLLADVSQEIMLDVLFQESDLVIEPNLIQRLVENANLCYAFAIVAVKTMCGLSDDTERLFNLVLFCADVTALCPNLNADWLAVFKILCCPFNSNQDQTSCDSLLNIDVSDHQCYQPLTVLTITLISRMCIRLEDFILHVAMPSLLPLWKHAGSAKVEKGPEASAKLTLHLLGKILLFFDYQGPKNALPAKTKGELSLICSSVDGMVPDAILTLLIAILMLDDSKVQELKSKENFDTKRSAKQFVEEDTNTAGNSDIGSTAIQLLELICRQEWTKRKFLHSTDLFDPKRLLNPLVNQTQAQRLLRMITRSDSEILLKKFDSCTTKKELISKVLDSLTIMNLWVSQMDLQLLLKQVANSQSESLHLVDTIAKSCMEVFQPQATFSFGEPSDDKDENAYLNALSFDEIAPCWLVAPLISRLPSFVQGRVLKAAVSILENCQARRDRNLFAQSSSLLAHQPFLSLVLICLRGQDDQREGLLSSLLKQIQEFVMRVKEDPYILCDRDIVSEMLDALQLRLSLIGGMFDTVCRNANLENWSLVIVQLLLYGIVTEEKNQTLFYTCVDILCVLLLSCLLPDSAGFSFSGQERTNEDCKRIYNNVIKKLKKEIGDRQMPSLRCVYQLLPIPRQMVDIIVCDEYGSQPQKGSRGGFSSSEVTQRKGLQIIGKEKLNPWEIIEGYNRENIGLKWSWFQGIRLDYQPETLFEQMMRMLPHDHHHAFNRPPMPGEPRSDPFLETLQVHYVPCTNETSDSDKLTTERLKSNGSVAISGGTLISEFSDQVQSPRTTKARVRKSTRGRKSSSRVAVSSNVALSSVPVRRIIVVLIHISWVLNYCLCTRCNEM |
Length | 1774 |
Position | Kinase |
Organism | Trichinella pseudospiralis (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.148 |
Instability index | 44.49 |
Isoelectric point | 6.48 |
Molecular weight | 202792.96 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06115
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 112.06| 34| 72| 235| 268| 1
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235- 268 (56.32/43.34) DKEMLLNGLLDIFAEKIYASS.FGILKMIVPVLLQ
309- 343 (55.74/42.80) DSENMKEGLLDYLNCPFHRTVlFGLSNVVHSVLID
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.97| 40| 48| 1210| 1251| 2
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1210- 1251 (62.13/49.56) TKRKFLhsTDLFDPKRLLNPLVNQTQAQRLLRMITRSDSEIL
1260- 1299 (64.84/44.49) TKKELI..SKVLDSLTIMNLWVSQMDLQLLLKQVANSQSESL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 130.39| 36| 48| 782| 819| 3
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747- 768 (21.96/ 8.32) ................LCSLS.RKIQNLVFYDQF..AVMdC
782- 819 (54.32/43.58) NGQS.NCLpTLENFDFLLGLL.EESSNFISLVEFmEAVI.C
832- 866 (54.11/33.03) NFQSaNSL.TLQYAVCMVGYMrKHHCYFIQL....ESVM.C
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.83| 28| 472| 190| 217| 4
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190- 217 (55.36/36.21) DLCS.....KLGE.FFS.LSMEVPMNSEF..ECHYRH
658- 694 (36.46/21.08) DSCSlrrvpKLSKhYFNvLHFPVPQDDQYrhECNQRQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 163.16| 48| 48| 940| 987| 5
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940- 987 (80.36/44.57) LADVSQEIMLDVLFQESDLVIEPNL.IQRLVENANLCYAFAIVAVKTMC
989- 1037 (82.80/46.14) LSDDTERLFNLVLFCADVTALCPNLnADWLAVFKILCCPFNSNQDQTSC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.72| 32| 330| 153| 189| 6
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62- 101 (43.12/23.36) KLTqsyNAIVSKKAEINALqdsykKKSGFKEP.SIW.HLAAK
153- 186 (52.61/51.16) KMT...NAHIAQQQECGKM.....KKKHMSDPfADWtHLVMK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.20| 51| 699| 419| 482| 7
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427- 482 (82.19/88.26) IIQHFLSILdCLDKFKFEYVNETNNTDA.lyktIFQSEKKET..RVDMDSIAVQFL...C..HW
1147- 1209 (66.01/40.07) ILTLLIAIL.MLDDSKVQELKSKENFDTkrsakQFVEEDTNTagNSDIGSTAIQLLeliCrqEW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 133.83| 43| 966| 345| 393| 8
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345- 393 (65.22/54.83) PTALI.WNEmECEDTGENgkAYLCGSPLD.LLYCSPVdLPLFVD.PSteFVK
1315- 1360 (68.62/37.60) PQATFsFGE.PSDDKDEN..AYLNALSFDeIAPCWLV.APLISRlPS..FVQ
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