<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06113
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MSVSLSDFETKVKNLFKEHAKSGIAYFFFRPYLMTSSEECEKKTIIFTANELVEIFTSVPQNLQESAFSIVISHRVLSNSANKIVDLFVRDVTQRQMLSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKGVRDTLKRLLDIPIPVHLQVDQRKSVEAVEKLIKTICDRKNNLLPAYFVITEIIKNLPEQRCFSHWRMADCFTEIIESFRPLAQLNSVCGRTFMTPIPGHVGFYFNAFWKLEALSLRFPLKGLLPYSQDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSVEEFAVILDLYRLLYTGRDIFTVSGSDSSCVLMLAPTCIWIHILKKSPSMEVELPPTVNTQRKFLQEALKNKTQFNTDNYMVAVLCNAYSSTSEIFQQDLLPILLENLDNTRGHNSTQASGNFASNATNSMPFPNGNVSEVKLRPLKLEFLDSVSVHGKNAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMLERTLLLQFQWYPHHEIFQAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISSNSDSCFIEGVYRELLNKLPCYSWPQSTLSVFPQQQQQQQQQQQQQQQQQQQQQQQPQPQQSSVVGSSQQQQQQQQQQQQQQNHLLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGPVTDRGPWVPDLNYYATLVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVSSWNYEDLICDFFYHVKYMYVGDSVRQETDRIIPMLRTSLQQKLRYISFAQGEQSGTPFSEMINPIKFLGIQMVVWLQRLPIFGETAQHFWLAVTKLGDPVMTFSLYFPALFPFFGTAAVDMVIVGAFSEICNCVAQVVMRWFRLRDFSGLCWLLYVVFLIAVSISRTYISAHFPDQVILGIVVGICIALVTRSLVGHRRRQWSNLIAFMIVLLLIALSVHEAHRFLGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISIAVLLANKSMLTNNNNNNSTSKPFSSKFAQALLGVGLNQLCKHLLFCC |
Length | 1627 |
Position | Tail |
Organism | Trichinella pseudospiralis (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.11 |
Grand average of hydropathy | 0.044 |
Instability index | 46.21 |
Isoelectric point | 7.48 |
Molecular weight | 187384.11 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06113
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.87| 29| 33| 725| 756| 1
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725- 753 (57.46/36.82) PQSTLSVFPQQQQQQQQQQQQQQQQQ...QQQ
759- 790 (51.42/25.29) PQQSSVVGSSQQQQQQQQQQQQQQNHlllKQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.72| 15| 80| 273| 287| 2
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273- 287 (28.85/17.69) RLLTHVFMHYTYRDA
355- 369 (28.86/17.70) KILHTKLTHYPYRYA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 183.01| 58| 611| 564| 652| 3
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315- 353 (43.96/11.89) ELMFTAeCDhsQLNPQAWRIISTQIIY..LTLQQSICFTRL.......................
592- 652 (101.59/111.78) EMMYIC.CE..ILNYRLFNIPSTYRVHaiVTLQQTLAFAKFQTNASLYWMLERTlLLQFQWYPH
1238- 1265 (37.46/ 9.82) ...................................LCHAVWLHSASGYLQLLPQ.ALRSTWIPH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.98| 21| 119| 169| 191| 6
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169- 191 (31.05/29.64) LIKTICDRKNNLlPaYF..VITEII
291- 313 (33.93/21.83) LLGTAKPEKSRI.P.YFeeVITEII
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 152.03| 53| 173| 823| 888| 9
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823- 888 (76.69/79.43) LLWRLVydtgELPAVSMKILE....VLGPrkvLIHLKSL......ADFLVYEtnsadvNRCVD...VLNRLIF..KYAVVP
997- 1064 (75.34/48.03) LLQKLV....ESPAACLKFLDstlsILGP...LYRFHPYpvsflySTFRFYE......KRLVEapaIKQKLALavHGACVP
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