<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06112
Description |
Mediator of RNA polymerase II transcription subunit 23 (Fragment) |
Sequence | LKRLLDIPIPVHLQVDQRKSVEAVEKLIKTICDRKNNLLPAYFVITEIIKNLPEQRCFSHWRMADCFTEIIESFRPLAQLNSVCGRTFMTPIPGHVGFYFNAFWKLEALSLRFPLKGLLPYSQDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSVEEFAVILDLYRLLYTGRDIFTVSGSDSSCVLMLAPTCIWIHILKKSPSMEVELPPTVNTQRKFLQEALKNKTQFNTDNYMVAVLCNAYSSTSEIFQQDLLPILLENLDNTRGHNSTQASGNFASNATNSMPFPNGNVSEVKLRPLKLEFLDSVSVHVRMNIANSLIGTFGRFMQGKNAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMLERTLLLQFQWYPHHEIFQAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISNSDSCFIEGVYRELLNKLPCYSWPQSTLSVFPQVFCSHYTQQQQQQQQQQQQQQQQQQQQQQQPQPQQSSVVGSSQQQQQQQQQQQQQQNHLLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGPVTDRGPWVPDLNYYATLVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDVSYSSEILF |
Length | 1188 |
Position | Tail |
Organism | Trichinella pseudospiralis (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
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Aromaticity | 0.11 |
Grand average of hydropathy | -0.055 |
Instability index | 50.91 |
Isoelectric point | 7.37 |
Molecular weight | 137381.28 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06112
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 107.33| 29| 32| 608| 639| 1
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608- 636 (59.77/36.42) PQVFCSHY..TQQQQQQQQQQQQQQQQQ...QQQ
640- 673 (47.56/21.38) PQPQQSSVvgSSQQQQQQQQQQQQQQNHlllKQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.72| 15| 85| 131| 145| 2
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131- 145 (28.85/18.13) RLLTHVFMHYTYRDA
213- 227 (28.86/18.14) KILHTKLTHYPYRYA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 186.41| 53| 171| 945| 999| 9
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945- 999 (97.56/62.44) CVPSR.....DDHWLLSAEfvSCVGSGPVTDRGPWVPDLN......YYATLVRRLMDTFSEPRQQW
1113- 1176 (88.85/51.07) CYPARilalcHAVWLHSAS..GYLQLLPQALRSTWIPHVRsegqflYVCHLVAPFLQRFYQERTKF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.49| 38| 278| 445| 490| 10
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445- 490 (57.58/56.42) LEILG.......LKQFTSHIVLTAARHQccemMYICCEILNYRLFNipstYRV
725- 769 (56.91/34.58) LEVLGprkvlihLKSLADFLVYETNSAD....VNRCVDVLNRLIFK....YAV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.66| 23| 307| 686| 710| 11
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686- 710 (32.38/26.37) SELSLIDyFTNTSTSTVYlCLLWRL
1003- 1025 (43.28/24.87) SDLRFVE.FNNFQTHALY.CICIEL
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