<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06111
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MSVSLSDFETKVKNLFKEHAKSGIAYFFFRPYLMTSSEECEKKTIIFTANELVEIFTSVPQNLQESAFSIVISHRVLSNSANKIVDLFVRDVTQRQMLSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKGVRDTLKRLLDIPIPVHLQVDQRKSVEAVEKLIKTICDRKNNLLPAYFVITEIIKNLPEQRCFSHWRMADCFTEIIESFRPLAQLNSVCGRTFMTPIPGHVGFYFNAFWKLEALSLRFPLKGLLPYSQDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSVEEFAVILDLYRLLYTGRDIFTVSGSDSSCVLMLAPTCIWIHILKKSPSMEVELPPTVNTQRKFLQEALKNKTQFNTDNYMVAVLCNAYSSTSEIFQQDLLPILLENLDNTRGHNSTQASGNFASNATNSMPFPNGNVSEVKLRPLKLEFLDSVSVHGKNAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMLERTLLLQFQWYPHHEIFQAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISSNSDSCFIEGVYRELLNKLPCYSWPQSTLSVFPQQQQQQQQQQQQQQQQQQQQQQQPQPQQSSVVGSSQQQQQQQQQQQQQQNHLLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGPVTDRGPWVPDLNYYATLVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVSSWNYEDLICDFFYHVKYMYVGDSVRQETDRIIPMLRTSLQQKLPLLRVNNQARHFPCRRSWYSSGVAVFQIQWKVEFHSVVLLYFFETVFLRAQMVVWLQRLPIFGETAQHFWLAVTKLGDPVMTFSLYFPALFPFFGTAAVDMVIVGAFSEICNCVLKWCVFFGILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLEFA |
Length | 1541 |
Position | Tail |
Organism | Trichinella pseudospiralis (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
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Aromaticity | 0.12 |
Grand average of hydropathy | -0.012 |
Instability index | 47.17 |
Isoelectric point | 6.68 |
Molecular weight | 178202.97 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06111
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.87| 29| 33| 725| 756| 1
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725- 753 (57.46/36.96) PQSTLSVFPQQQQQQQQQQQQQQQQQ...QQQ
759- 790 (51.42/25.33) PQQSSVVGSSQQQQQQQQQQQQQQNHlllKQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.72| 15| 85| 273| 287| 2
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273- 287 (28.85/17.43) RLLTHVFMHYTYRDA
355- 369 (28.86/17.44) KILHTKLTHYPYRYA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.13| 41| 84| 112| 154| 3
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112- 154 (70.99/52.71) ELNINSC..GW..NDTFAFFMEniSLLDYKGVRDTLKRLLDIPIPVH
193- 237 (68.14/44.45) NLPEQRCfsHWrmADCFTEIIE..SFRPLAQLNSVCGRTFMTPIPGH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 110.14| 25| 84| 1423| 1447| 4
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1423- 1447 (44.99/21.46) QHF.WLAVTKLGDP....VMTFSLYFPALF
1462- 1481 (28.43/11.10) ......AFSEICNC....VLKWCVFFGILL
1503- 1532 (36.72/16.29) KQFqWTCETGPGSPsghaMVSASVWFNLLY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.40| 25| 85| 440| 475| 6
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450- 475 (41.35/54.76) QRkFLQEALKNKTQFNTDNY..MVAVLC
1284- 1310 (43.05/24.91) QR.FYQERTKFTMDITTDLYqmLYNVDC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 127.89| 38| 171| 1062| 1102| 12
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1062- 1102 (69.59/46.30) CVPSR.....DDHWLLSAE.FVSCVgsgPVTDRGPWVPDLN......YYATLV
1230- 1279 (58.30/31.43) CYPARilalcHAVWLHSASgYLQLL...PQALRSTWIPHVRsegqflYVCHLV
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