<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06108
Description |
F-box-like/WD repeat-containing protein TBL1X |
Sequence | MATDSSTDEDSSKPDEDDNCSAPASLLESVPAEHLNFLVWKFFKDYGYHTTAELFAQNNAVKENAGIEDLSICKGSLNKLLEMLHFKSVVDGDIPETGSLYDLVPGECFLSESSSCTETSSSENYSEDSSFREVVVKYIMRTNYNYSICSLDWNFEDLLLTGSADKIVRLWNFEVKEEETRHSCREMTSFGDENDDVNLPVSNDVILVSWSPQQDLIASADSSGKLKIWKKDGSFMINCFNVPEDIVVMKWNVNGRYLLTAATDGIISIWSSSGNCIECCAPFEDDITDADWKDDATFSACSKDGMLIHCRVINANAESSFRGHVNSINMIKWDPTGNMAATCSSDMMVKVWQFGNERCIGCLRGHTAEVNTLSWHCTDPAILASGDDNGAVCVWDAIKAEILHMLHKHLEPVRILAFRPGSDMLISCSTDCVIYLWDGRNGKRLRKIGSGYDATVNVMMWNRSGERIAVGRQDGTANMETDEASDPAPVVVYSRRRIPTLRMRSPIPVEDLHYLVWRFLKDTGQHRIAKQFECESQVLCSMLDSELPYICFGSLEILLDALYKKCVQDGDIQESGSLLELVPARVYYPSEVVLSPDTDSSGSDSPSDHMLQSVRPIKMCRWGIKVVKILSKVGHNADVSNCAWNPKEDFLLTGSVDKIVHLWNLENDLTNMDENCILASLDLTTLQLSDSRHLLPNLTSVSWSPDGETASSVGLAGQFCIWKRDGSFLFTCSHPTNPILLLKWSTDGKHLLTASSNGVIVIWTASTGELYADYGPFSANVTDADWKDDSTFSVSFDNGTLFHCSPTDPFVMSTFEGHQMRVNMIRWDPAGKMLASCSDDQLVRIWRLNSQTYDFSLCGHTAEVDVLCWHDTDRAILASGSSDQSVRVWNVCRGENLYAFCFHTSPICTLQFRPGSDILASTELDNRIMLWNVKVGGLLEEIENDDQKRIYDLAWNRNGEKLAMVKEDGLIEVFYVESDQ |
Length | 980 |
Position | Tail |
Organism | Trichinella pseudospiralis (Parasitic roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.231 |
Instability index | 44.27 |
Isoelectric point | 4.69 |
Molecular weight | 109592.21 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06108
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
13| 462.46| 39| 39| 298| 336| 1
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147- 185 (30.66/12.55) .....S.ICS........LDW...NF..E..dlLLT..GSADKIVRLWNFeVKE....................eET..RHSC...R
193- 239 (22.36/ 7.15) EN.D.D.VNLpvsndvilVSW...SP..Q.qdlIAS..ADSSGKLKIW.............................kkDGSFminC
240- 279 (30.35/12.35) FN.VPEdIVV........MKW...NV..NgrylLTA...ATDGIISIWS..SSG.....................NC..IEC.....
298- 322 (21.59/ 6.65) .................................FSA..CSKDGMLIHCRV.INA.....................NA..ESSF...R
323- 364 (52.52/26.76) GH.VNS.INM........IKW...DP..T..gnMAA.tCSSDMMVKVWQF.GNE.....................RC..IGCL...R
365- 407 (50.33/25.34) GH.TAE.VNT........LSWhctDP..A...iLAS..GDDNGAVCVWDA.IKA.....................EI..LHML...H
408- 444 (32.35/13.65) KH.LEP.VRI........LAF...RP..GsdmlIS...CSTD.....CVI.YLW.....................DG..RNGK...R
634- 695 (30.56/12.49) GH.NAD.VSN........CAW...NP..K.edfLLT..GSVDKIVHLWNL.ENDltnmdencilasldlttlqlsDS..RHLL....
696- 732 (28.01/10.83) ....PN.LTS........VSW...SPdgE....TASsvG.LAGQFCIWK..RDG.....................SF..LFT....C
733- 769 (26.56/ 9.88) SHpTNP.ILL........LKW...ST..D.gkhLLT..ASSNGVIVIWTA.STG.....................E...........
817- 858 (54.48/28.03) GH.QMR.VNM........IRW...DP..A.gkmLAS..CSDDQLVRIWRL.NSQ.....................TY..DFSL...C
859- 901 (55.06/28.41) GH.TAE.VDV........LCW...HD..TdraiLAS..GSSDQSVRVWNV.CRG.....................EN..LYAF...C
902- 933 (27.63/10.58) FH.TSP.ICT........LQF...RP..G.sdiLAS..TELDNRIMLWNV.....................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 387.27| 112| 476| 23| 134| 2
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23- 134 (203.18/131.58) PASLLES.VPAEHLNFLVWKFFKDYGYHTTAELFAQNNAVKENAGIEDLS.ICKGSLNKLLEMLHFKSVVDGDIPETGSLYDLVPGECFL.SES..SSCTETSSSENYSED..SSFREV
499- 617 (184.08/118.45) PTLRMRSpIPVEDLHYLVWRFLKDTGQHRIAKQFECESQVLCSMLDSELPyICFGSLEILLDALYKKCVQDGDIQESGSLLELVPARVYYpSEVvlSPDTDSSGSDSPSDHmlQSVRPI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.33| 16| 491| 282| 297| 3
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282- 297 (33.91/19.47) PFEDDITDADWKDDAT
776- 791 (33.43/19.09) PFSANVTDADWKDDST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.94| 23| 491| 461| 483| 4
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461- 483 (43.23/25.59) WNRSGERIAVGRQDGTAN...METDE
955- 980 (36.71/20.76) WNRNGEKLAMVKEDGLIEvfyVESDQ
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