<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06098
Description |
RNA polymerase II-associated protein 3 |
Sequence | MAKLMKENFPPDRERVVTKTSELQITLIPTHNKKSASLILCLSTELDCLRIFQLTVVMQSDKNSNEAPQRIEELIGELQQLRKDIRLCFRGVDCSPEEQVHRVRVLYKELLLKDRLVKHLKQISVQLVNVQVNDSQLLNEEVFKIPDLLDVGPSTEKASSSNNNNGKKLSLSCPKCSCIILRENHGEQVTVEKELPELSLKADGTVDMKTFTEFVRVDDIYDFENIGFSRDSNGVQYLLCAACEIGPLGFHDLTTKLSYVASVRHNVNLVMLVRKERKDISEKDAQKALFEKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVKALYRRGMASKGLNNFDDAVEDFQHVLTLDPNNDIAKKELEEIISKVKPAENDPLLVYPVENPDEKEYQKPLKVIIVRDAVKKSQFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNIPCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLSQQENMVLNVKNTWHLKTVLDKAKHVCSKDQVQRWDDLFKKYIETAINKNDNEEEASVESFPKFYPTRIYPLSRVSVNECSSALVLK |
Length | 651 |
Position | Middle |
Organism | Trichinella sp. T6 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.362 |
Instability index | 39.62 |
Isoelectric point | 6.25 |
Molecular weight | 74362.65 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | guanyl-nucleotide exchange factor activity GO:0005085 IEA:UniProtKB-KW
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GO - Biological Process | protein transport GO:0015031 IEA:UniProtKB-KW
small GTPase mediated signal transduction GO:0007264 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP06098
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.18| 31| 32| 299| 330| 1
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299- 330 (52.73/36.33) YVK.KDYEKAIMCYSRSISADP.FRPVVYcNRAM
332- 364 (46.46/26.52) YLKlKNYAEAYADCSKALTFDStYVKALY.RRGM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.88| 28| 29| 23| 50| 2
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23- 50 (47.66/37.95) LQITLIPTHNKKS...ASLILCLSTELDCLR
52- 82 (42.22/32.69) FQLTVVMQSDKNSneaPQRIEELIGELQQLR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 217.92| 74| 302| 121| 203| 3
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121- 203 (97.96/87.10) KQISVQLVNVQVNDSQLlNEEVFKIPDLLDVGPSTE.KASSSNNNNGKKLSlSCPKCsciiLRENHGEQVTVeKELPeLSLkAD
426- 500 (119.95/72.79) KPLKVIIVRDAVKKSQF.NSQQPALSDESNVTKQSEqKISDYKLNASIKIT.RIPKC....YAELRADWISI.KEEP.LAL.AD
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