<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06089
Description |
Lysine-specific demethylase 8 |
Sequence | MILLVRIGLALLQCCFGYTWSILECFFKKPKSVTDKVIVITGAARGIGKGLALLLAHLHAKIVLVDLDESTNKQTAEELRQETSACVYAYTADVTDPESMRQVANAIVTNPELGCPDVLVCSAGVLIPKLLEDHSDVEIYRTMNTIRAFYPYILKRGQGHIVAVSSYGGHFGNSYSCCYSASKFAVRGLMESLEWEIYDHGFGGEIKTTTIYPFFTRTDLLSSCNVTSDVIPVLTPEETSQGILKAILYEQTEAFIPFYGSLICYFFKGRTFKAIELEDFEAAVEICNFMLNTGHWSEVNISWRLLYSMVSLLLSIAHIANGRLKDALCSCDKGLLLGCPISGNILAKLASLLHCKMIDTYPLEDVLINDKFDQALASMNDVCEHFEHSVPRVECPSLETFQRDFLIPQNPVVIEGALESWQAMEKWNIAYLMSKCAYRTVPIEIGSKYTNDEWSQKLLTVTDFVHEYFNPDAREKAYLAQHQLFEQITELKDDIAVPDYCCLQCAPEDVDINAWFGPANTVSPLHTDPRDNLFAQVFGQKYLRLCHPTATKNLYPITDGLMSNTSQIDMEKIDYEKFPLVKNVKFYETIVKPGDLLFIPKATGIACDVMSSAGSAAVQSSLASGLLPSPSNLYYQSLGHITGGEGISRNGSRTPVSQRRVGHFTRARHHSSCDVHSLCDGVTFERCFDSQLPPADPQIHAGGFKSGFPFSARSSSNSYRQPTLSSHLSHGNLGYLQSDCDWSADLDPLVKNGRGSNEAPGCGSVSKIVNGRMTTTNCCPADCDALREDLRVAMEKLNATMGSIKSFWSPELKRERALRKEETAKMNMLQEQLKLSLVNNQKQSVLIEQLQNELRFQCNSGRSRRFPDDGPLIGHEDYRTVCQERDMYRRDWLISSDAVKELQYQLESQRQLLLSKDESVKRLLEALHSKGVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCDDLESHLQQSHDGLSSLRKDAVIESLQDEVASYEAELKRLRSGGAIHEREFTDKMVTDKEYQELKLKADKLELELGQKTVEIQALYTRLSTAEESASDFKKHLELMKESNASKDQQATLLQSDIDALRGKLESKNEMIDQKAQQITELQADKNRLLSELNLLNEQHRISEVGLSTKDRKIDLLEETIRERDCELNLIRTRLNSSPGVIQEKKLQDEINRLVQERDLWRKRFNEEHECLAIERKRDGEAHEKENKDLRIAIASLQKEISDRQVFIESQNEKINDMVRQTEALTKENSLYKELNKTNGVDLLKAEIERLNQAVDESRSEVDRLLKIIHNSEKEKNEGRESGNDSKRFHSNTENADYQVRCEISVLMHKDRRIEELEEALKESVSITAEREMAVAQQKLNSQRAEQRIAALKDELKTMQEQYDELSIQLKQLRQEKVQSDATIKTMQEERKRYVDEVMQLKGEVLLAAIEEKDAHIAFLENFHGRKSSEEIDNVKKQKEELLQRLKEENARRVKLHNDPTLNFTDHFPKRHWWPAMGIAWYDLVYLYSDPEKSDRQDVLLDSLQTALDNMDAKQAGFFSLTSETFFSTTTTNAKPVHLFQSSEFPETTFVLVGDTLGSASTFLFAEKSITQMIRNLDGAYCTKPISKVECRGNKYVISDFTVRTSVATIASNFKGILVEIEYRPCVAMQLCGDLMKEFCTALLGSAASAPPTFVGLTKPNQRYVPIDTIFQKMSVQTAGPNEQQSQAQPQPQQQQQQQPQQQQQQQQQ |
Length | 1739 |
Position | Head |
Organism | Trichinella sp. T6 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.458 |
Instability index | 47.76 |
Isoelectric point | 5.49 |
Molecular weight | 197001.09 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | cytoplasm GO:0005737 IEA:UniProtKB-SubCell
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | methyltransferase activity GO:0008168 IEA:UniProtKB-KW
oxidoreductase activity GO:0016491 IEA:InterPro
transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | methylation GO:0032259 IEA:UniProtKB-KW
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP06089
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 810.63| 219| 223| 973| 1195| 1
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791- 1067 (274.67/232.50) RVaMEKLNATMGSIKSFWSPELKrerALRKEETAKMNML.QEQLKLSLVNNQKQSVLIE.QLQNELRFQCNSG.RSRRfpDDG.PLIgHEDYRTV......CqERDMYRRDWLISSDAVKELQYQLESQRqLLLSKDESVKRLlealhskgvpasvaqscaemelaqnriveleekcsrlqahcddleshlqQ.SHDGLSSlrkDAVIESLQDEVASYEAELKRLRSG...GAIHERE....FTDKMV.........TDKEYQ.ELKLKADKLELELGQKT..VE.IQALYTRLSTA.EESASDFKKHL
1068- 1296 (291.39/243.15) EL.MKESNASKDQQATLLQSDID...ALRGKLESKNEMIDQKAQQITELQADKNRLLSElNLLNEQHRISEVG.LSTK..DRKIDLL.EETIRER.....DC.ELNLIRTRLNSSPGVIQEKKLQDEINR.LVQERDLWRKRF................................................nE.EHECLA.......IERKRDGEA.HEKENKDLRIA...IASLQKE....ISDRQVfiesqnekiNDMVRQtEALTKENSLYKEL.NKTngVDlLKAEIERLNQAvDESRSEVDRLL
1297- 1498 (244.57/198.09) KI.IHNSEKEKNEGR...ESGND...SKR..FHSNTENADY........................QVRC.EISvLMHK..DRRIEEL.EEALKESvsitaER.EMAVAQQKLNSQRAEQRIAALKDELKT.MQEQYDELSIQL................................................kQlRQEKVQS...DATIKTMQEERKRYVDEVMQLKGEvllAAIEEKDahiaFLENFH.........GRKSSE.EID.NVKKQKEELLQRL..KE.ENA..RRVKLH.NDPTLNFTDHF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 179.12| 56| 276| 313| 458| 2
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395- 458 (85.37/172.06) CPSLeTFQRDF...LIPQNPVVIEGALESwqameKWNIAYLMSKCAYRTvPiEIGSKYTND.........EWSQKL
679- 746 (93.75/59.78) CDGV.TFERCFdsqLPPADPQIHAGGFKS.....GFPFSARSSSNSYRQ.P.TLSSHLSHGnlgylqsdcDWSADL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 295.29| 90| 434| 136| 228| 5
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136- 228 (151.27/121.67) DVEIYRTMNTIRaFYPYILKRGQGHIVA.VSSYGGHFGNSYSCCYSASKFAvRGLMESlEWEIYDHGFGGEIKTTTIYPF.............FTRTDLLSSCNVTS
574- 677 (144.02/102.40) DYEKFPLVKNVK.FYETIVKPGDLLFIPkATGIACDVMSSAGSAAVQSSLA.SGLLPS.PSNLYYQSLGHITGGEGISRNgsrtpvsqrrvghFTRARHHSSCDVHS
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