<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06062
Description |
Mediator of RNA polymerase II transcription subunit 14 (Fragment) |
Sequence | LLMILSVNCAITKMSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLHTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFGNNVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPNEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIVNEFDNLVIINLSLILRFLEIAGNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1311 |
Position | Tail |
Organism | Trichinella sp. T6 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | 0.027 |
Instability index | 43.32 |
Isoelectric point | 6.23 |
Molecular weight | 148862.47 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06062
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.23| 19| 90| 1172| 1191| 1
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1172- 1191 (33.65/22.65) QQHAYVESSTAYWIpEMCFL
1261- 1279 (36.58/19.74) QQTAQQSNCTVYPI.ETCLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 233.82| 74| 244| 331| 416| 4
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331- 416 (115.60/117.16) KLVLSYWK.EQNQGGVASFKVIFWI.NQDEPFAplqvthipkseLKLPSMDTESGQLSLDNLLTETVLIRVKHrLQQLCDF.LHTIKGL
578- 654 (118.23/89.77) QLCLFSWKiQKKQCVIPELMAAFSMcENAMPFF...........LLMEEMERTSARYAYHQLFDGTVVLRVLG.IDQTYDRnLEKIFGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.08| 25| 28| 832| 859| 5
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832- 859 (40.47/32.04) LTTLPDTIFRVGSEHTSNQMLYlnrMFS
861- 885 (47.61/29.42) LPTGPDTVRLLCKDHLCLEMRF...TFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.26| 18| 34| 1096| 1113| 6
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1096- 1113 (32.66/20.94) KFFLNE.SNL..SSVMFKFFR
1129- 1149 (22.60/12.22) KYFLEQiSSTynAAAMYAFVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.05| 13| 27| 447| 459| 7
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447- 459 (25.57/12.86) LFTGKFVCRLPAF
476- 488 (24.48/12.02) FFTLKSCETLPAF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.91| 10| 27| 1017| 1026| 13
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1017- 1026 (21.57/12.25) PSSRSPPEDW
1046- 1055 (23.35/13.90) PSGTHPHPEW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.00| 26| 846| 29| 54| 16
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29- 54 (47.56/28.84) AFPLPSIPANQGPPFMAFGVLLDFAV
896- 921 (46.44/27.99) AFGLPQMKSVKYVPITGFKTFLNLHI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.76| 13| 27| 520| 532| 19
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520- 532 (23.96/17.93) DHPDD.SAKVNLDF
548- 561 (17.80/11.27) DADDDvRSKKNVNL
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