<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05980
Description |
Coiled-coil domain-containing protein 47 |
Sequence | MIMRMQEVDKNFINSVGGIVQNIKSIQSSISEVLAKLQMVDQPSLLNSFRVISSQFNSMLQLLRSDRASHFKNYVFLPIKLSVEVDADLEAATENRLHAWTHAVVPDYLRTKPDPQVEQKDQQISNQVQQRICNPESLQKQITAFNRCLNCILDSLNASIRDSEMDGRKTSKTSDGEDTALLVAAILKGQNVKPAYSATPASSRGSSGDSGHSKASKAQVRIATTHHPCCFILKKQCMAKNKCSININQFTTERRKTCIWMFFLSCLFEFVELSVKQVSQIDDNEFAEFEEFDVELDASVDADFTANNVNERETPPVDTASIGAKRSPAYAEQKLNDAPNNNFNDDDYGIVEDESVDDFSHLLDENEFENFPDERRPGKQNAGPSKTVTQLKITDVPGHLRNNWNNFVVELFLIFGLVVYTKNHSLAVAWFDSNRPFLEENFSIVGDDGISPEVTKNVLIKESDNHYIVWCSGRQGCIGMEIHLKLIKRQDLLSLIFYIIRPKFDVIEIKIILNPEEMDPFVFALGTKRSAIKNSKEIMDLNLYCSEKKNVEKLGLPSSYILHSEIGEVTTGLIDTKIVSALCKYKDVVDYIHISDQFVGIKPIEMENMTKPPETAKCLTKCEYLVPGQLRATEEDVSSLQPLMIFIFHVLEKVRRFRLTREGKQKADKNRQYVEESFLKTTHAQRQEAAQQRREERARERKERLMAEEDPERQRKLEKQELKRELKKKQPRVKQIKIKAMLRFLIKAKQIHC |
Length | 753 |
Position | Head |
Organism | Trichinella murrelli |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.473 |
Instability index | 42.73 |
Isoelectric point | 6.64 |
Molecular weight | 86143.42 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
rough endoplasmic reticulum membrane GO:0030867 IEA:UniProtKB-SubCell
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP05980
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 260.93| 81| 229| 356| 442| 1
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356- 442 (134.25/120.57) VDDFSHLLDenefeNF....PDERRPGKQNAGPSKTVTQLKITdVPGHLRNNWNNF.VVELFLIFGLVVYTKNHSLAVAW.....FDSNRPFLEENF
588- 678 (126.68/96.46) VVDYIHISD.....QFvgikPIEMENMTKPPETAKCLTKCEYL.VPGQLRATEEDVsSLQPLMIFIFHVLEKVRRFRLTRegkqkADKNRQYVEESF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 205.59| 64| 233| 208| 292| 2
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208- 275 (103.68/121.73) GDSGHSKASKAQVRIATTHHPccFILkkQCMAKNKC.SININQFTTERRKTCIWMFF.LSCLFEFVELSV
446- 511 (101.91/68.57) GDDGISPEVTKNVLIKESDNH..YIV..WCSGRQGCiGMEIHLKLIKRQDLLSLIFYiIRPKFDVIEIKI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.90| 39| 595| 109| 149| 3
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109- 149 (62.23/46.41) LRTKPDPQVEQK..DQQISNQVQQRicNPESLQKQITAFNRCL
705- 745 (58.67/36.54) LMAEEDPERQRKleKQELKRELKKK..QPRVKQIKIKAMLRFL
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