Description | Mediator of RNA polymerase II transcription subunit 26 (Fragment) |
Sequence | LKHGDSVQANASVAGGAFKGSPVKLLGQREEGTLKFDLSLFVNNVAKACEAMDAIESVVMTKESLESSRLGLLINEVRRSNQLLHPDLAKRCRLLIKKWRKLISTTPTPTPTPTTTTQPAITDNGVDTAGVAPVAADDRAIRIRIKLGSSVNEATILGGQEKKQQQQQQQLDNCGIEQAENRRKRKHTSQNAPNNSKMNGISKTHLSAIGGNGGGSGETFSLASTVSKPCKPPRSSSSCSRPVPLPTAPASQPRHPPPPQPPLPPPSAPTPPPPPPPPPPPQSSPPPLPPSPPPPTPPPPPPPSTSPSLTTTSSRPPKLKTTAQLVADLTKCYPEELLVNINTSIGVDSTNALQQATASNSRDDAPSPALLFSAVEHQQPSGGGGGEVNKLELLEKYLAEDADQQQQNQDHVVAGSSSGACTSSSSVDSDTSSRSSTPSRDKIVRASDDDDDDAPPRSGPGTVSSPSDGGGKPGLVDDSRRPIRRLPPVDRSMLDRLDEIPSPSKSRVSSLKYLDDYSNEPPERTRALAPFEQSLRMLPSEMRQLHSRVLVKTTDGRQVLALPYVDIGLPDFLEYDNSPATTEQLISWEAIRW |
Length | 593 |
Position | Unknown |
Organism | Trichinella murrelli |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia> Trichinellida> Trichinellidae> Trichinella. |
Aromaticity | 0.03 |
Grand average of hydropathy | -0.678 |
Instability index | 72.75 |
Isoelectric point | 7.72 |
Molecular weight | 63204.03 |
Publications |
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP05970 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 119.50| 20| 20| 261| 280| 1 --------------------------------------------------------------------------- 237- 259 (31.98/ 6.06) SScsrPVPLPTAPASQPRHPPPP 260- 279 (47.55/12.44) QP...PLPPPSAPTPPPPPPPPP 280- 300 (39.97/ 9.33) PP..qSSPPPLPPSPPPPTPPPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 114.42| 28| 72| 361| 388| 2 --------------------------------------------------------------------------- 361- 388 (50.20/19.53) SR.........DD.....APSPALL.FSAVEHQQPSGGGG..GEV 407- 440 (31.88/10.01) QN.........QDhvvagSSSGACTsSSSVDSDTSSRSST..PSR 441- 476 (32.34/10.24) DKivrasddddDD.....AP.PRSG.PGTV..SSPSDGGGkpGLV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.23| 13| 15| 487| 499| 3 --------------------------------------------------------------------------- 487- 499 (24.48/13.66) PPVDR.SMLDRLDE 503- 516 (18.75/ 8.79) PSKSRvSSLKYLDD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 151.43| 49| 203| 107| 155| 5 --------------------------------------------------------------------------- 107- 155 (82.53/43.87) PTPTPTPTTTT....QPAITDNGVDTAGVAPVAADDRAIRIRIKLG.SSVN...EAT 301- 357 (68.90/35.29) PPPSTSPSLTTtssrPPKLKTTAQLVADLTKCYPEELLVNINTSIGvDSTNalqQAT --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) RLLIKKWRKLIS 2) SLKYLDDYS 3) VNKLELLEKYLAEDA | 93 510 388 | 104 518 402 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab