<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05950
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFDEDISLIAQLTEKLDDSHWNCLEDLLHQIRVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRMTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITAFFNCYLLFDLFSHLCERIFFLKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIVNQFDYLVIINLSNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1335 |
Position | Tail |
Organism | Trichinella murrelli |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | 0.011 |
Instability index | 43.38 |
Isoelectric point | 6.02 |
Molecular weight | 152191.07 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05950
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 297.20| 88| 138| 301| 392| 1
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301- 349 (66.71/40.65) .........................................GDFMSENLSVEEYVS.....SEKLVLSYWK..EQNQGGVASFKVIFWINQ.DEP..FAP
350- 389 (38.98/29.32) LQVTHIPKSELKLPS.MDTESGQLSLDNLLTETVLIRVkHR...........................................................
414- 492 (98.55/65.92) LSITFLPDSSF.......TETLDLSM.NLFT..........GKFVCRLPAFDEDISliaqlTEKLDDSHWNclED...LLHQIRVRIFVNRiDHTmrFFT
493- 552 (92.96/61.70) LK......SCETLPAfLKTACEQWPVD....RRFIIKF.HR.........FENYY.........IVLTF....NDHPDDSAKVNLDFWLVC.NE......
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 206.37| 63| 137| 610| 746| 2
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612- 675 (104.91/99.80) AAFSMCENAM.PFFLL....MEEMERTSARYAYHQLFDGTVVLRVL..GIDQTYdRNLEKIFGLPKGLAIG
748- 817 (101.47/95.69) GAYKSCLHRMtPLSMLssykLTLVYGPMLRYVCHLQWKPSEKMYILsfGVDNSV.LNEEYVYFNPHSILCG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.30| 30| 645| 208| 240| 7
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208- 240 (49.38/36.44) FHVAGEFEA.QLTLLGQ....LPRTPWTllnLRILVSD
854- 888 (45.93/26.49) FRVGSEHTSnQMLYLNRmfsiLPTGPDT...VRLLCKD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 107.08| 36| 315| 242| 285| 8
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242- 285 (50.72/45.13) RVTDG.SDILSSLQLSFLHhliqsrLNVSKepIVELYRVIHCFCL
559- 595 (56.35/31.18) RSADAdDDVRSKKNVNLLH......FDLRR..VVSETKVFHQLCL
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