<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05949
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFDEDISLIAQLTEKLDDSHWNCLEDLLHQIRVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRMTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIGNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1291 |
Position | Tail |
Organism | Trichinella murrelli |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.020 |
Instability index | 44.25 |
Isoelectric point | 6.03 |
Molecular weight | 146659.56 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05949
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 111.53| 23| 54| 424| 446| 1
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111- 134 (23.75/11.74) FVDTADrlYQMN......CDvlqnaRLPVF
424- 446 (43.65/28.24) FTETLD..LSMNLFTGKFVC.....RLPAF
480- 502 (44.13/28.64) FVNRID..HTMRFFTLKSCE.....TLPAF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.37| 22| 366| 283| 311| 2
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283- 311 (34.01/35.75) FCLSAQLDI.LCCQAYRLIgdfmsenLSVE
654- 676 (37.35/21.96) FGLPKGLAIgLSCDRHRVV.......WSIE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.97| 27| 140| 598| 644| 5
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360- 386 (43.21/13.93) LKLPSMDTESGQLSLDNLLTETVLIRV
613- 639 (45.76/23.00) LLMEEMERTSARYAYHQLFDGTVVLRV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 268.38| 89| 633| 142| 240| 6
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142- 240 (133.25/129.76) VLTLGTYprlPSVIKREFIRtadISQEEEEC..VLHRLNYVIERRLLPSLL.TLPEGMRNFTVNNGMVtFHVAGEFEA.QLTLLGQ....LPRTPWTllnLRILVSD
780- 876 (135.13/100.55) ILSFGVD...NSVLNEEYVY...FNPHSILCghLQHWFNAVRDISALAHLLqASSAALQALTTLPDTI.FRVGSEHTSnQMLYLNRmfsiLPTGPDT...VRLLCKD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.43| 35| 447| 62| 102| 12
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62- 102 (51.54/55.22) DRKIsIAQFaHSarqlFVRLYAILKWARC...GAKVDLCTGIVC
513- 550 (61.90/43.63) DRRF.IIKF.HR....FENYYIVLTFNDHpddSAKVNLDFWLVC
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