<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05940
Description |
RNA polymerase II-associated protein 3 (Fragment) |
Sequence | LKFICHLCHMVLDACQSDFVPVTLTNRLCALIRCDKNSNEAPQRIEELIGELQQLRKDIRLCFRGVDCSPEEQVHRVRVLYKELLLKDRLVKHLKQISVQLVNVQVNDSQLLNEEISNPSSDVGPSTEKASSSNNNNGKKLSLSCPKCSCIILRENHGEQVTVEKELPELSLKADGTVDMKTFTEFVRVDDIYDFENIGFSRDSNGVQYLLCAACEIGPLVMLVRKERKDISEKDAQKALFEKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVKALYRRGMASKGLNNFDDAVEDFQHVLTLDPNNDIAKKELEEIISKVKPAENDPLLVYPVENPDEKEYQKPLKVIIVRDAVKKSHFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNIPCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLGRTDFIYLKTVLDKAKHVCSKDQVQRWDDLFKKRIETAINKNDNEEEASVESFP |
Length | 569 |
Position | Middle |
Organism | Trichinella murrelli |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.368 |
Instability index | 40.41 |
Isoelectric point | 5.75 |
Molecular weight | 64876.70 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | guanyl-nucleotide exchange factor activity GO:0005085 IEA:UniProtKB-KW
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GO - Biological Process | protein transport GO:0015031 IEA:UniProtKB-KW
small GTPase mediated signal transduction GO:0007264 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP05940
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.18| 31| 32| 250| 281| 1
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250- 281 (52.73/42.00) YVK.KDYEKAIMCYSRSISADP.FRPVVYcNRAM
283- 315 (46.46/30.71) YLKlKNYAEAYADCSKALTFDStYVKALY.RRGM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.31| 24| 32| 27| 52| 2
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27- 52 (37.70/26.88) RLC.ALIRCdkNSNEAPQRIEELIGEL
60- 84 (39.61/22.19) RLCfRGVDC..SPEEQVHRVRVLYKEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 216.64| 73| 281| 95| 175| 3
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95- 175 (99.48/108.65) KQISVQLVNVQVNDSQLLNEE..ISNPSSDVGPSTEKASSSNNNNGKKLSlSCPKCsciiLRENHGEQVTVeKELPeLSLkAD
377- 451 (117.17/91.59) KPLKVIIVRDAVKKSHFNSQQpaLSDESNVTKQSEQKISDYKLNASIKIT.RIPKC....YAELRADWISI.KEEP.LAL.AD
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