<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05910
Description |
RNA polymerase II-associated protein 3 (Fragment) |
Sequence | LKFICNLCHMVLDACQSDFVPVTLTNRLCALIRCDKNSNEAPQRIEELIGELQQLRKDIRLCFRGVDCSPEEQVHRVRVLYKELLLKDRLVKHLKQISVQLVNVQVNDSQLLNEEISNPSSDVGPSTEKASSSNNNNGKKLSLSCPKCSCIILRENHGEQVTVEKELPELSLKADGTVDMKTFTEFVRVDDIYDFENIGFSRNSNGVQYLLCAACEIGPLVMLVRKERKDISEKDAQKALFEKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVKALYRRGMASKGLNNFDDAVEDFQHVLTLDPNNDIAKKELEEIVTISKVKPVENDPLLVYPVENPDEKEYQKPLKVVIVRDALKKSQFNSQQLALSDESNVTKQSEQKISDYKPNASIKITRIPKCYAELRADWISIKEEPLALADYILNIPCDCFSYLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLSRADFIYLKTVLDKAKHVCSKDQAQRWDDLFKKYIETAINKNDNEEEANVESFQ |
Length | 571 |
Position | Middle |
Organism | Trichinella nelsoni |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.358 |
Instability index | 38.36 |
Isoelectric point | 5.64 |
Molecular weight | 65158.00 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | guanyl-nucleotide exchange factor activity GO:0005085 IEA:UniProtKB-KW
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GO - Biological Process | protein transport GO:0015031 IEA:UniProtKB-KW
small GTPase mediated signal transduction GO:0007264 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP05910
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 111.99| 25| 31| 279| 303| 1
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250- 269 (26.88/16.24) ....YVK.KDYEKAIMCYSRSISAD
279- 303 (43.97/31.41) RAMAYLKLKNYAEAYADCSKALTFD
313- 337 (41.13/28.89) RGMASKGLNNFDDAVEDFQHVLTLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.31| 24| 32| 27| 52| 2
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27- 52 (37.70/27.75) RLC.ALIRCdkNSNEAPQRIEELIGEL
60- 84 (39.61/22.92) RLCfRGVDC..SPEEQVHRVRVLYKEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 216.40| 73| 283| 92| 175| 3
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92- 175 (97.07/99.29) KHLKQISVQ..LVNVQVNDSQLlneEISNPSSDVGPSTEKASSSNNNNGKKLSlSCPKCsciiLRENHGEQVTVeKELPeLSLkAD
379- 453 (119.33/80.38) KPLKVVIVRdaLKKSQFNSQQL...ALSDESNVTKQSEQKISDYKPNASIKIT.RIPKC....YAELRADWISI.KEEP.LAL.AD
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