<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05902
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEETMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDYLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFDEDISLIAQLTEKLDDSHWNCLEDLLHQIRVRLFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETMSNAIRSADADDDDRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNVEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITAFYNCCLLFDLFSHLCERIFFLKTFLNLHISEVKAAIEAERKVSTAVHDSLMEVSDVDFSGNSGTGSSMVLENSMRTSTQNRLIVNQFYYSVIINLSLILRFVQYQRLKKQKRNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQSAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNSTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1344 |
Position | Tail |
Organism | Trichinella nelsoni |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.003 |
Instability index | 44.75 |
Isoelectric point | 6.26 |
Molecular weight | 153466.64 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05902
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1228.08| 303| 310| 25| 331| 1
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25- 327 (503.55/352.80) NQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLD................................RKIS...IAQFA...HSARQLFVRLYAILKWARC.GA...KVDLCTGIV..CFLDQQASMFVDTADRLYQMNCDVLQ.NARLPVF........QIPTAVDVLTLGTYPRLPSVIK.REFIRTADISQEEEEC..VLHRLNYVIER..RLLPSLL.TLPEGM...RNFTVN.NGMVTFHVAGEFEA.QLTLLGQ....LPRTPWTLLNLRILVSDP.....RVTDG.SDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCL.SAQLDILCCQAYRLIGDF.MSEN.....LS.VEEYVSSEKLVLSYWKEQ
342- 641 (374.18/262.91) NQDEPFAPLQVT...HIPKSELKLPSM.DTESGQLSLD................................NLLTetvLIRVK...HRLQQLCDYLRTI.KGLTC.TF...ISDMPALSI..TFLPD..SSFTETLD..LSMNLFTGKfVCRLPAFdedisliaQLTEKLDDSHWNCLEDLLHQIRvRLFVNRID............HTMRFFTLKscETLPAFLkTACEQWpvdRRFIIKfHRFENYYIVLTFND.HPDDSAK....VNLDFWLVCN.ETMSNAI.....RSADAdDDDRSKKNVNLLH......FDLRR..VVSETKVFHQLCLfSWKIQKKQCVIPELMAAFsMCENampffLL.MEEM...ERTSARYAYHQ
643- 968 (350.35/244.29) .....FDGTVVLRVLGIDQTYDRNVEKIFGLPKGLAIGlscdrhrvvwsielnttgsplgdsssfgravhRKIT...ILSCTvgnESARKC...LDDVLSGVRCfNAlyePVKALAGAYksC.LHRLTPLSMLSSYKLTLVYGPMLR.YVCHLQW........KPSEKMYILSFGVD...NSVLN.EEYVY...FNPHSILCghLQHWFNAVRDI..SALAHLLqASSAAL...QALTTL.PDTI.FRVGSEHTSnQMLYLNRmfsiLPTGPDT...VRLLCKDHlclemRFTFS.GSVFMR.DCGSAFGLPQMK.SVKYVPITAFY...NC.CL.LFDLFSHLCERIFFLKTF.LNLH.....ISeVKAAIEAERKV.......
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