<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05901
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEETMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDYLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFGNKLHVNLVVLTEKLDDSHWNCLEDLLHQIRVRLFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETMSNAIRSADADDDDRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNVEKIFGLPKGLAIGLSCDRHRVVWSIELNTTGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPSEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEVKAAIEAERKVSTAVHDSLMEVSDVDFSGNSGTGSSMVLENSMRTSTQNRLIGNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQSAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDENDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNSTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1297 |
Position | Tail |
Organism | Trichinella nelsoni |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.014 |
Instability index | 44.29 |
Isoelectric point | 6.22 |
Molecular weight | 147478.63 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05901
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.59| 19| 119| 485| 504| 1
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428- 446 (36.37/18.20) LDLSMNLFTGKFVCRLPAF
485- 503 (37.22/23.63) IDHTMRFFTLKSCETLPAF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 131.53| 40| 697| 196| 236| 2
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196- 236 (67.84/42.94) MRnFTVNNGMVTFHVAGEF.EAQLTLLGQLPRTPW.TLLNLRI
895- 936 (63.69/35.91) MR.FTFSGSVFMRDCGSAFgLPQMKSVKYVPITGFkTFLNLHI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.49| 47| 458| 62| 116| 5
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62- 116 (67.02/69.95) DRKIsIAQFaHSarqlFVRLYAILKWARC...GAKVDLCTGIVCflDQQASMFVDTAD
514- 563 (81.46/55.55) DRRF.IIKF.HR....FENYYIVLTFNDHpddSAKVNLDFWLVC..NETMSNAIRSAD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.59| 29| 458| 321| 349| 6
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321- 349 (55.75/40.24) LSY.....WKEQNQGGVASFKVIFWINQDE..PFAP
777- 812 (43.84/29.93) LRYvchlqWKPSEKMYILSFGVDNSVLNEEyvYFNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 174.70| 54| 697| 370| 425| 7
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370- 425 (84.61/60.67) GQLSLDNLLTETVLIRVKHRLQQ.LCDYLRTiKGLTCTFiSDMPALSITFLPDSSFT
1070- 1124 (90.09/56.03) GQLSLKCNQSEMKFFLNESNLSSvMFKFFRD.ENDACTE.SDVQFLEKYFLEQISST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 131.82| 40| 311| 273| 312| 11
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273- 312 (73.12/41.32) IVELYRVIHCFCL.SAQLDILCCQAYRLIGDF.MSEN.....LSVEE
584- 630 (58.70/31.84) VVSETKVFHQLCLfSWKIQKKQCVIPELMAAFsMCENampffLLMEE
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