<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>
Description
Ectonucleoside triphosphate diphosphohydrolase 1 Sequence MDEGRKNINARKAMLLKEYQVLLQRSVKSIRENFTEIIRMAKVGEEGQVSRLTEYEHELFEMQIRAANMTHAAEALIKMVTDLKQFLILNDFAYINESITTSAVHSQIIQREFRDKLIAVKEEMTFYLQEAEQEYYNTALKNSVSVLDLFEIECLRIKMTLDEFGTELYVDPWQTFVSIKGKLRKRAFRSPNLAEVVKDYDALASRLLDENCTEYSALCRMNMAKCKNQLGNIDQEAVEYRTAGRLYIRAEKEKESVENRLSMECLYMAMHCYNEAIRLHLSQGQKLLAASLLIELGKELACMQHPEDAIQNFEKAIHLLDTHPHAVGHALRWKLCVETSVGFLADARRTSNFYRQIVESWPNSGFRKLHLNELEIITVMLLLALKPIKSEMNDFEKRVLQRYSDETDEALLSSSEGSLLPNDSYIISVEIYLHLKSFVLAINNNDPSAADIALTAIHHRNVKLVHSAEADASLPLRVFIKSLFYNESSVSLEVDSDFKVRDVINAYAYRTGHSEKDEEFVLRFHDHSSLNSEDVLHVLGIYNDEELIISVRGEDSSRSRNSWWWLGSVALLISLVGLTAVSVLFALSGDLPDEFGIIIDAGSSHSGLYIYTWNGRKNKTGVIKQYAPSCSTEDGISSFTDNPTDAGNSLIFCLNNASATVPSKRHSATAMYLAATAGMRILEIRDPLSSCKIINAVSNTMHSYNFLFKNASIISGIDEGIYGWITLNFLSHRLMNSASKLNDIRPLTIGAMDLGGASTQIIFEINNSEFTERNYSLKLFGETYNLFVDSYLCCGVNEVQRIIQAQIVAEDTTNQQPLHPCLPLNYTMNVTSEQIFLMPCSLNQKPNNVLPNYVFRGSSDPHSCLKKIRHMLDTSVCSVKKAKIPKPRGEFMAFSGMYWTANFFNCTSGCSYNKFFENTQNYCEKSWSSIEAAAYPYKKTFLSTYCFTGLYSLTLFKDAYHFSDAQIQKIEFVNEIDSTEIGWTLGFMLNATNQLPEEQPIEHIGLIEFSLITTICCIVRKMVSSTFLPWSQCSK Length 1035 Position Head Organism Trichinella nelsoni Kingdom Metazoa Lineage Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
Aromaticity 0.10 Grand average of hydropathy -0.163 Instability index 36.79 Isoelectric point 5.72 Molecular weight 117471.80 Publications
Function
Annotated function
GO - Cellular Component mediator complex GO:0016592 IEA:InterPro
GO - Biological Function ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
transcription coregulator activity GO:0003712 IEA:InterPro
GO - Biological Process regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
Interaction
Repeat regions
Repeats
>MDP05899
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.03| 19| 22| 234| 255| 1
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209- 227 (35.78/19.62) DENCTEYSALCRMNMAKCK
234- 252 (31.25/24.48) DQEAVEYRTAGRLYIRAEK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 106.44| 22| 26| 705| 727| 2
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705- 724 (29.09/16.48) ..NF....LFKNASI.....ISGIDEGI.YGW
726- 751 (30.51/19.42) TLNFlshrLMNSASK.....LNDIRPLT.IGA
962- 983 (16.77/ 6.13) .........FSDAQIqkiefVNEIDSTE.IGW
984- 1006 (30.07/13.94) TLGF....MLNATNQ.....LPEEQPIEhIGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.80| 19| 22| 467| 485| 3
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467- 485 (31.20/22.44) SAEADASLPLRVFIKSLFY
491- 509 (31.60/22.82) SLEVDSDFKVRDVINAYAY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.90| 23| 26| 802| 826| 4
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802- 826 (35.12/30.62) IIQAQI.VAEDTTNQQPlHPCLPlNY
830- 853 (38.78/24.05) VTSEQIfLMPCSLNQKP.NNVLP.NY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.81| 14| 175| 770| 784| 6
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770- 784 (22.89/20.80) FTERnYSLKLFGETY
947- 960 (26.92/18.55) FTGL.YSLTLFKDAY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.23| 34| 74| 89| 122| 7
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89- 122 (56.13/34.00) LNDFA...YINESITTSAVHSQIIQREFRDKLIA..VKE
161- 199 (50.10/29.64) LDEFGtelYVDPWQTFVSIKGKLRKRAFRSPNLAevVKD
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Explaination for Stockholm format The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.#=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.
Alignment of MDP05899 with Med22 domain of Kingdom Metazoa
Intrinsically Disordered Regions
IDR Sequence Start Stop
NA NA NA
