<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05781

Description Uncharacterized protein
SequenceHHSEYIVAQRQAIENCIETISRIRALSSPDPCQQHVRFATLRNQLYRIALQCDLQLGDTGPILPPGLSSSGGIAWRISADCFSVVISAIPADGYSLPPGTTPPEDYPVSVAAVHFEFNQDKPIECNVLVEDLKKRNYNSLLKHVKNLIALYDLPGEIAQRCRAYLCLQALEQDLLMLTTAVSNRISNAATPLSLEPPNPPWKTANPPSDVNCLAQSINGSAVGQVVQRTGGAFTVLTYFVSAAQKAIAMSHASKHSNRAEPEAGMLGGFCASVGLRATANANQHSLPLVSLVNVIKDADGYNVAQFTNADGITRVNIAAEFFLKLHPPLLFDVESISEIEAITISIHMGDLGVSEARVVGAVLPEGFLFDPEQNKVKESSNEDKYDPTGILARSHSLPVALTWLLLQLGCPVVKMLTFTFPDKSVTSNGACKTIKPVGKQRSAIYLARARNALHLSDDASADGLLAGADKLSEKSLQDAERLFLSDGVEGGAGILYDPTAGTTPSWPILQTSQSLPPLPSQQFPSRPLLPPGVMATTPPAGLTSDQLSVPTPKGLDDTFPSPALSSNNQSFRSIPVIPGVMTTSATSLFGQPMKPPISYSAASTPSSIGFKPQTPASCGGSMLVSLLDEDNPPQSLPPPPHVGPSALPPNRILSSPVTAATPLPSSPITAQVPNSNHSTPLTLIPAFPKSSGSSDVLSHLLTSTGNIGVGGSNSIPVGANSSANSSTQSLPSALKSTTNSETGVSKKGRKRRVDPPMGGFISTLPTRAAIMDAMKQPTKPTPSKPAMLAKESVYDFEDCPPSTNIAPPPPAPFPPPKPFAFSDVSAPERTAERKSGLKFVIKTNRSGSGGGLTAASAATATTPTENAAVVTKPRTKAVEGKPFALFKQMQQQQQPSASSQHPKKERKRRVSSKSKEVQPSLVLSISSPKMFPSAPIVTSTPSPKKHGLVKGKPGRKKTLSTSSEPKRNRLISLDEPPVEPGAIVPSSGVSGVGSSSGGNSTNRLIKGYKIPKVRKLPSPPSNNSPPVASQAINQEDAATARAEVTPTVTAMSTPLPPPPPPAPAAPSTIPTTTTKSQQRSLLFIVENLKRAVVESSAAPHLHQQQTTSTTVVELARGSTEGSGDAANIAEDTLPADSNDNLFEKFSSAPTPTKGGTLSVAPLPAKRLRVTPTLGAGVYDLNDVNLNCRPPEAVVVAVANVSATAAGASEVEAEREESGDVGVTLFGQDGQSDSQTPPANLDEETTAAGGLIKAPTDTPDSPTESMSAKTFIASSKIIPVSQEPPPSGHTPSLPTGTVANSAVVAASSSSPFFNKPLSSGRPTSGTLRGGMARGAAGPRFTYLRGGWSSRPYGSPMMPRGTGGGGGAGRLPLPPWGGGPGGPPQPPPGPGGGVGGSGGWGLPRGGAPLYRIGGGGSGVGVGRGGGVSAGSSGGGPFCGGGNRQAPPKT
Length1447
PositionMiddle
OrganismTaenia asiatica (Asian tapeworm)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Taeniidae> Taenia.
Aromaticity0.05
Grand average of hydropathy-0.265
Instability index54.74
Isoelectric point9.13
Molecular weight149722.58
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05781
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|    1111.35|     168|     168|     515|     682|       1
---------------------------------------------------------------------------
  407-  514 (122.29/27.84)	..........................................QL..G....CPV.VK..MLTFTFPDKSV...TSNG.ACKTIKPVGK..QRSAIYLARARNA........LHLSD...DASADGLLAGA.....DKLSEKSLQDAERL..FLSD.GVEGGA..G.................ILY.DPTA...GT..TP..........SWPILQTSQ....S
  515-  682 (292.48/76.02)	LPPLPSQQFP...........SRPLLPPGVMATTPPAGLTSDQL..S....VPT.PK..GLDDTFPSPAL...SSNNQSFRSIPVIPGVMTTSATSLFGQPMK........PPISY...SAASTPSSIGF.....KPQTPASCGGSMLV..SLLD.EDNPPQ..S.LPPPPHVGPSALPPNRILS.SPVT...AA..TPLPSSPIT..AQVPNSNHSTP..LT
  683-  853 (166.49/40.36)	L..IPA..FP.......kssgSSDVL.SHLLTSTGNIGV....................GGSNSIPVGAN...SSANSSTQSLPSALKSTTNSETGVSKKGRK....rrvdPPMGG...FISTLPTRAAImdamkQPTKPTPSKPAMLAkeSVYDfEDCPPS..TnIAPPP...PAPFPPPKPFAfSDVS...APerTAERKSGLKfvIKTNRSGSGGG..LT
  893- 1050 (140.38/32.97)	QQPSASSQHPkkerkrrvsskSKEVQPSLVLSISSPKMFPSAPIvtS....TPS.PKkhGLVKGKP.....................GRKKTLSTS..SEPKRnrlisldePPVE....PGAIVPSS.GV......SGVGSSSGGNSTN..RLIK.GYKIPKvrK.LPSPP...SNNSPP..VAS.QAINqedAA..T......AR..AEV......TPtvTA
 1055- 1158 (127.93/29.44)	LPPPP....P...........PAPAAPSTIPTTTTK....SQQR..SllfiVENlKR..AVVESSAAPHL.....HQQQTTSTTVVE..LARGSTE..G...............SG...DAANIA..........EDTLPADSNDNLF..........EKFS..S.AP.............................TP...............TKGGT..LS
 1159- 1273 (141.55/33.30)	VAPLPAKRLR...........VTPTLGAGVY......DLNDVNL..N....CRP.PE..A........................VVVAVANVSAT.........................AAGA.SEVEA.....EREESGDVG....V..TLFG.QDGQSD..S.QTPPANLDEETTAAGGLIK.AP.........TDTPDSP.T..ESMSAKTFIAS....
 1278- 1388 (120.22/27.26)	.........P...................VSQEPPPSGHTP.....S....LPT.....G...TVANSAVvaaSSSSPFFNK.PLSSG.RPTSGT.LRGGMAR....gaagPRFTYlrgGWSSRPYGSPM.....MPRGTGGGGGAGRL..PLPP.WGGGPG..G..PPQPPPGP................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.90|      11|      24|    1389|    1412|       2
---------------------------------------------------------------------------
 1389- 1404 (19.80/12.27)	GGgvggsGGWGLPRGG
 1413- 1423 (22.09/13.20)	GG.....SGVGVGRGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     277.03|      91|     108|       2|     105|       3
---------------------------------------------------------------------------
    2-  105 (128.55/109.48)	HSEYivAQRQAIEnC...IETISRiRALSSpdpCQQHVR.FATLRNQLYRIALQCDLQLGdTGPILPPGLSSSGGIAWRISADcfSVVISAIPADGyslPPGT.TPPED
  114-  209 (148.48/84.10)	HFEF..NQDKPIE.CnvlVEDLKK.RNYNS...LLKHVKnLIALYDLPGEIAQRCRAYLC.LQALEQDLLMLTTAVSNRISNA..ATPLSLEPPNP...PWKTaNPPSD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.60|      10|      35|     325|     334|       4
---------------------------------------------------------------------------
  325-  334 (19.59/ 9.63)	LHPPLLFDVE
  363-  372 (20.01/10.00)	LPEGFLFDPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.83|      10|     108|     281|     291|       5
---------------------------------------------------------------------------
  281-  291 (14.99/13.03)	ANQHSLPlVSL
  392-  401 (18.84/10.88)	ARSHSLP.VAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05781 with Med1 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGSMLVSLLDEDNPPQSLPPPPHVGPSALPPNRILSSPVTAATPLPSSPITAQVPNSNHSTPLTLIPAFPK
2) IGVGGSNSIPVGANSSANSSTQSLPSALKSTTNSETGVSKKGRKRRVDPPMGGFISTLPTRAAIMDAMKQPTKPTPSKPAMLAKESVYDFEDCPPSTNIAPPPPAPFPPPKPFAFSDVSAPE
3) PKMFPSAPIVTSTPSPKKHGLVKGKPGRKKTLSTSSEPKRNRLISLDEPPVEPGAIVPSSGVSGVGSSSGGNSTNRLIKGYKIPKVRKLPSPPSNNSPPVASQAINQEDAATARAEVTPTVTAMSTPLPPPPPPAPAAPSTIPTTTTKSQQRSL
4) SWPILQTSQSLPPLPSQQFPSRPLLPPGVMATTPPAGLTSDQLSVPTPKGLDDTFPSPALSSNN
5) TAAGASEVEAEREESGDVGVTLFGQDGQSDSQTPPANLDEETTAAGGLIKAPTDTPDSPTESMSAKTFIASSKIIPVSQEPPPSGHTPSLPTGTVANSAVVAASSSSPFFNKPLSSGRPTSGTLRGGMARGAAGPRFTYLRGGWSSRPYGSPMMPRGTGGGGGAGRLPLPPWGGGPGGPPQPPPGPGGGVGGSGGWGLPRGGAPLYRIGGGGSGVGVGRGGGVSAGSSGGGPFCGGGNRQAPPKT
6) TAERKSGLKFVIKTNRSGSGGGLTAASAATATTPTENAAVVTKPRTKAVEGKPFALFKQMQQQQQPSASSQHPKKERKRRVSSKSKEVQPSLVLSI
7) VESSAAPHLHQQQTTSTTVVELARGSTEGSGDAANIAEDTLPADSNDNLFEKFSSAPTPTKGGTLSVAPLPAK
619
707
928
505
1203
830
1093
689
828
1081
568
1447
925
1165










Molecular Recognition Features






MoRF SequenceStartStop




1) APLYRIGG
2) KESVYDFE
3) KPFALFKQM
4) NRLIKGYKIPKVRKLPSP
5) RFTYLR
6) RKSGLKFVIKT
7) RSLLFI
1405
790
881
1002
1338
833
1079
1412
797
889
1019
1343
843
1084