<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05761

Description Uncharacterized protein
SequenceLDMVPFAGITLDTHPGFRLDRAQLTLSMIRQAKLYPPAFKTRQLSLACSLLGQLRCTQLASGLLACDERQAMGPLMTPVGLAISELIFSVMEITEAEKRTDWTIKVFGHLADLVICFVVDRIVRLDDIITKLNSKIVGRFWPVSRYFVMWFTLVCMSGFVGKNKLSDFVSCLRLYDHLFPESDELDNAAMGRLKKLEKEDTECWIRRGDLITLDTLETMAKDPDRRFIIFSPDRLFGVPDTDSAEEDQGGSSRDQTSHGTAAIDAVCDYTSSSDSSDDEDLEAGEDGPIPAKKPKLTQDEDLTHLVAAVVCAWEVVLQMNSADETTVRGQSGVGSTGGCVKDGHLPRPMPPLLYPLQLQISDWLEQLKDACGQDNSSLTESGDTAPDSQSSASVERMSWLEFIVTLNTYSPNENSQKITRSVVNAFWLPNNEHVPGIGGGLPLNNGTFTLPYGLSGAGRLKPLSHRLIRKMSVHLQMIFCNEMRQKLNEMTKPPCPEPGTACLTSPATLETFSRFLSYQVEKNLIIPILQIYKRMLQIKGQVDIPLYHDEVAGPEATELPKSMPNNDDFYAFTFWFDLLGHRLVEALPAEHRLSYRDDLFHKVELESQELYPQDVVFLLNNAEISPLFVIPRQLDGNFLDWTIHWLTSLDWTIVRFSRRILTPDCILYTMSKSMPNDTSPSPPALKSQHLIHPREVTSRVILLSTLQAVSAFDLLDVGSVRCIIEQQLMTVRTETRAVFGVDTARLLLPSIISRRLTDLLPSSSFGTTSFFGFCANETVLPPDGSSALAQAPIFESLEPAAGDGEPENYASLRDRLLISVYELFKSLVPEAGGEIAWDELSLQGERCFCVIITAILNGHSGLPWALINNILQLSPATVNAQLKVLCEYLIAAICKFEELDRRGLCPPAHLPTPSALLSALLTFCVQYHIITMDRLLLYLFVRSNQSPVDVAAAHSIAIFLFTQCPQLVEAINAVANFAPNSPEIISSHRWPKLLKRLHEILPEKQAINRPPADSSGSSTVLRRYPCQPVYYDHLILRLVPVLELIFTSFLDNPPPLLQLARFCNLVAPLFRLHCRFDLVFSFACVFPPPPKFLCLACAELLKYRTLYPCIHC
Length1112
PositionTail
OrganismMesocestoides corti
KingdomMetazoa
Lineage
Aromaticity0.08
Grand average of hydropathy0.020
Instability index50.87
Isoelectric point5.36
Molecular weight124220.89
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05761
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.30|      32|      35|    1042|    1074|       1
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  977-  997 (25.15/ 8.69)	.......F...APNSPEIISSHRWP.KLLK..RL......
 1042- 1074 (55.92/33.37)	LELIFtSF...LDNPPPLLQLARFC.NLVA..PLFR.LHC
 1076- 1112 (42.23/20.27)	FDLVF.SFacvFPPPPKFLCLA..CaELLKyrTLYPcIHC
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     238.79|      82|     548|     101|     373|       2
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  203-  296 (121.59/295.77)	CWIRRgDLITLDTlETMAkdpdrrfiIFSPD..RLFgVPDTDSAE.ED.QGGSSRDQTS.HGTAAIDAVCDYTSSSDSSDD...EDLE.AGEDGPiPAKKPKL
  722-  812 (117.20/15.96)	CIIEQ.QLMTVRT.ETRA........VFGVDtaRLL.LPSIISRRlTDlLPSSSFGTTSfFGFCANETVLPPDGSSALAQApifESLEpAAGDGE.PENYASL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     359.57|     108|     422|     445|     561|       3
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  342-  388 (43.92/15.82)	...............................................................DG..HLPRP........M...PPLLYP......LQLQISDWLEQLkdACGQDNSSLTE.SGDTAPDS
  389-  498 (183.05/95.34)	QSSASVERMS.WLEFIVTLNTYSPNENSQKITRSVVNAFWLP.NNEHVPGI.GGGLPL....nNG..TFTLPYGLSGaGRL...KPLSHR......LIRKMSVHLQMI..FCNEMRQKLNEMTKPPCPEP
  504-  626 (132.60/83.03)	TSPATLETFSrFLSYQVEKNLIIPILQIYKRMLQIKGQVDIPlYHDEVAGPeATELPKsmpnnDDfyAFTFWFDLLG.HRLveaLPAEHRlsyrddLFHKVELESQEL..YPQDVVFLLNNAEISP....
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     196.65|      58|     536|     101|     159|       4
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  101-  159 (102.52/68.30)	DWTIKVFGHLaDLVICFVVDRIVRLDDIITKLNSKIVGRFWP...............VSRYFVMWFTLVCMSGF
  640-  712 (94.13/58.36)	DWTIHWLTSL.DWTIVRFSRRILTPDCILYTMSKSMPNDTSPsppalksqhlihpreVTSRVILLSTLQAVSAF
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.47|      13|      16|     905|     920|       7
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  905-  917 (25.72/17.57)	CPPAHLPTPSALL
  924-  936 (24.75/ 8.71)	CVQYHIITMDRLL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      27.92|       8|      20|     937|     947|       9
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  937-  947 (10.79/12.49)	LYLFvrsNQSP
  958-  965 (17.14/ 8.82)	IFLF...TQCP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05761 with Med23 domain of Kingdom Metazoa
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