<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05759

Description Uncharacterized protein
SequenceLAPYGIIAHLITSFQPSLPNDASVEKELELWKRFYPVQLSGENYNFLNSNTHYGSFNMDFLTPNKSPQQQVSRIDSSTKRIPPNCIEQLPHFVDVLIGGFRTRYPTCFVLIAEDVLSSLTRELQDASDRRVMPAPNTRNTGAEIHSLLHPRLPLTRLPSVKRRAYLAARALQRALRCELSLLPNLDYYHINKIKSRLPIQAPADDAPFSGNSDTRKNIRSAILPMHRRFGPMSRTLRAFLSEVDTCGGGGGDAPTTAPRRQLAVADPAMPTLSPQPLNSGAFGMNTLPVVGGDSLSSSSTSAAPPAVSNQQAAHLSSGAKPPCLLNSQLQNIKDGISHNINSKPMDWEETHVAPTTYKVRLLRFYTLMSLSANLVIKTDRLPSSIYYFKLPRGVVRTHQVHKQGGMLTNPPPPQPPPLVRSEASGGEQSWLAEQVLYHVSEQGKCGRSHLRRPPLIRMSLMDQVSPLEHPSTSFPSEVMLKQSCVSDEIAVDLSLFRRSQRQQYHSQSSGGHPSGSTFGTLVDSHGFGADEANFHPQVQHQQQHHHASQPYFHKQDLPYLTKDSEPHTHEPHTALDGFHRTLEDELHGPGSKLDGHPKGPALMRNLSRHMPISGRSLFSSGGSGHLGAAELATMYPTPPSHESVFSVGAVGGSCTAQPSPTETKPLFVPESHHYSQSPMDESGGVPATRPRQKQGVAHSILQSFLHNSRPLFDQNVVCSHLLSSVKSSSSFCGLKNGATSLGMGLDPGCAYAEFKKSENLQIPFSAKFRISPEELQLYKEVDIATRPPLAFHHLSFSTNGKQESLLVLPRRPPLPPVPSRAPHQHHPSRGLNQTELVFDEPASNTFDLDELRRSDSLKVNLILSDSFLNLFKDHNFDSCNICECTTSVLGVEVDVYVSSPNSAPTRSSGNLFWEDESEVASLSIAGVEGRKTHSRPLSTYSTAANYLPTLTQWMHGPLEEFGVRFLIEWLQHTDAALRLDDQPEGTLEKDALYDYSVQRSSCVLGIHECFLHFQDICALTASALEQSACDPPSLTEGMTGDFAVRVGGRQLRLDETTHKEGVVLHPAFFRQLPGDIPSNKNDQIRLLGSVRLWLQEAIDLLESTYKVEGPLTWKAFHQLAGRGRSESSKAQPIPQFRVGGGANNGKTNVLISPFSVHDWVRLLT
Length1164
PositionMiddle
OrganismMesocestoides corti
KingdomMetazoa
Lineage
Aromaticity0.07
Grand average of hydropathy-0.424
Instability index65.10
Isoelectric point7.13
Molecular weight128307.23
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05759
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     736.44|     174|     313|     143|     322|       1
---------------------------------------------------------------------------
   28-  182 (94.22/49.27)	......................................................LE.LWKRFYPvqLSGENYN.FLNSNTHYGSF..NMDflTPNKSPQQQV..SRID....................................SSTKRIPPN....CIEQLPHfvdvL..............IGGFRtryPTcfvliaedvlssltrelqdasdrrvmpapntrntgaEIHSLLHPRlplTRLPSvkrRAYLAARALQRALRCELSLL
  183-  322 (219.57/100.03)	PNLDYYHINKIKSRLPIQA..............PADDAPFSGNSDTRKNIRSAILP.MHRRFGP..MSRTLRA.FLSEVDTCGGG..GGD..APTTAPRRQL..AVADPAMPTL..SPQPLNSGAFGMNT...LPVVGGDSLSSSSTSAAPPA...VSNQQAAH....L..............SSGAK...PP............................................................................
  324-  496 (196.60/89.81)	..LLNSQLQNIKD..GISH..............NINSKPMDWE.ETHVAPTTYKVR.LLRFYTL..MS..LSAnLVIKTDRLPSSiyYFK..LPRGVVRTHQ..VHKQGGMLTN..PPPP........QP...PPLVRSEASGGEQSWLAEQVlyhVSEQGKCG....R..............S...............................hlrrpplirmslmdQVSPLEHPS...TSFPS...EVMLKQSCVSDEIAVDLSLF
  499-  649 (123.54/52.36)	SQRQQYH.SQSSGGHP...sgstfgtlvdshgfGADEANFHPQVQHQQQHHHASQPyFHKQDLP.yLTKDSEP.HTHEPHTALDG............FHRTLedELHGPG.SKL..DGHP.KGPALMRNLsrhMP.ISGRSLFSSGGS.........GHLGAAE....LatmyptppshesvfSVGA..................................................................................
  659-  748 (102.50/41.92)	..................S..............PTETKP.....................LFVP..ESHHYSQ...SPMDESGG........VPATRPRQKQ..GVAHSILQSFlhNSRPL....FDQN......VVCSHLLSSVKSSSSFCG...LKN.GATS....L..............GMGLD...PG............................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.85|      22|     322|     788|     815|       2
---------------------------------------------------------------------------
  788-  815 (34.11/33.09)	PL...AFHHLsfSTNGKQESllvlPRRPPLP
 1110- 1134 (36.74/19.70)	PLtwkAFHQL..AGRGRSES....SKAQPIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.00|      19|      83|     948|     966|       3
---------------------------------------------------------------------------
  948-  966 (38.20/24.17)	PTLTQWMHGPLE.EFGVRFL
 1032- 1051 (30.80/17.95)	PSLTEGMTGDFAvRVGGRQL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05759 with Med13 domain of Kingdom Metazoa
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