<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05745

Description Uncharacterized protein
SequenceMFAAESIIENSNCSLSDKQSESIFYLNSDDFRPLPQKPRTRFESEQIPQTGEETVEIELASQFYSWLGSSSHTDYSEFIQTETELLSNFENQEKYCTAIISKTEEILSILNELKEKYHSVSDKTNNLHETCENLLRKQTDLNEKADQIEEYLQSFNALFSIESKLSNRNLVLSAERMDEVLQSIDQSIVFLNEHRTFKDSEAFLTRFINCLNIALLMVKEGIKNSIRQVVLEIVELGDAISPENSFILLYGRFRAKASRIRSLMQLMESRADTSEKYCDVITECQAYYLSKREALVLPVARASIADLTNKYSRDHCELFRTTISFMLHMVEDESLLFFRFFQSQKTPTQTTRSPLSLESMLTNLCNCVYDALRPFLVHINHIEILTELCDLLIHEFIEDNATANKNVDLTAFENMCQTLLADVQQRLIYRAHIYIKSQIQDYQPGPGDIAYPEKLEMLESITSNLQQQQQQGQADKSESSSEVQGRASSTDSTDFHGMWYPTVRRALVCISGLSRCLDVESFQGLAQNCLSSCIDSLLLAQKRIETRRTPSDGQLFFIKHLLILREQVTPFNVDFRVRETTLDFSNITNAAYQVLPKVGSKFFDLSKANHLLRLLLLEGPTVIDNDVDSRRQLDRQLKLTCELFISDSIRALTGQISHLLEMAKLASSSVSSQPLGPPNGIKETVSASFRQLSFNQQETSLSPKTLAAIRRKLVLYLGNANTVAIIMRPIENGVVQTWRKFGAVIDEHYSEEDRMVIGSMAGNFWQSSHYLEWLLDRQDVLKYRANDLKKLGSEEEYQKIMIFFIDVIQAFGKSVEVRQQVIATASVYFRRFYSRTSLRSIDPWLMAPSCLFLASKVEEYGVIQPKSLITACCKVVSSQYSKYFKDYVYPYRTHDVFECEFILMEAMDCSLVVFHPYRPLLNFCNDLKPHLLDLAEEHLQRAWAFANDTLRTDLCLHYPPYLIALGCVQLALISLSKRPPSTSENANDHHSLYFSNQSSSNALAIAEQWFSELNVDLVKVLEVVRYILAHYDLLERMDMENEIPTLILTKMPRPIVQQPANQQQAQGQSGGASGSVPAGGGPQQHPRIVPQQQPPPMPSHHHQMPPPPHPSQNLGPPM
Length1118
PositionKinase
OrganismHymenolepis nana (Dwarf tapeworm) (Rodentolepis nana)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Hymenolepididae> Rodentolepis.
Aromaticity0.09
Grand average of hydropathy-0.269
Instability index53.33
Isoelectric point5.51
Molecular weight127569.81
Publications









Function






Annotated function

Involved in ER-Golgi transport.



GO - Cellular Component
cis-Golgi network	GO:0005801	IEA:InterPro
membrane	GO:0016020	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process
intracellular protein transport	GO:0006886	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05745
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.54|      36|     159|       1|      45|       1
---------------------------------------------------------------------------
    1-   45 (57.65/64.89)	MFAAESIIENSNCSLSDK......QS..ESIFYLNsddfrplpqKPRTRFESE
  158-  201 (50.89/35.93)	LFSIESKLSNRNLVLSAErmdevlQSidQSIVFLN.........EHRTFKDSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      54.91|      13|      26|     104|     116|       4
---------------------------------------------------------------------------
   84-   94 (14.19/ 7.05)	.ELLSNF.ENQEK
  104-  116 (20.32/13.74)	EEILSILNELKEK
  132-  144 (20.41/13.83)	ENLLRKQTDLNEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     130.68|      41|     322|     571|     613|       5
---------------------------------------------------------------------------
  571-  613 (61.27/48.85)	FNVDFRVREtTLDFSNITNAAYQVL....PKVGSKFFDLSkANHLLR
  897-  941 (69.41/45.83)	FECEFILME.AMDCSLVVFHPYRPLlnfcNDLKPHLLDLA.EEHLQR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05745 with CycC domain of Kingdom Metazoa
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