<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05688

Description BMA-MDT-31
SequenceMERCSFILKKKNRECRMLVKNGQKYCGEHAIYDDQNEDRIICPNDPRHTVNKSHLQKHLSSRCNSRLPEVPWIVKNFNLAGSPNGVEPWYRPSDGEFLRIRKIIERIYNQIANDITDSFLKNDFIENCASSFSKLKKKHIWQISSIIEHLRIIELLNNDKRWCMIDFGTGRAQLSYWMAKIAPKCRFLLIEKMGSRNKFDNKIHKELDLVFLERLRCSVEHLDLSKIDLIRDVDNTAAVCKHFCGAATDFGIRCLMNGVKSGLNVNGFVLAPCCHHRTTYNEYIGRAFLGSHGICSSNEFAALRHISTWAVCGFLNQENLDGTVSLSSHSPKFENLGQQKAKLEFMLLNSAEKELLGQKAKAVLEFGRVVELRKNFERVSSLDLLRGSGLNSVSGPETSEEQKKRFEIECEFVQALANPHYLNFLAQRGYFKEPYFINYLKYLLYWKRPEYARALKYPQCLHFLEAVQSSAFREAITCTANAKFIEEQQCIQRNTMMTNRNGSSSIHNGKKLQRHLPNLIALFFALSIVYSKSFVTTAEPTVDLPSTCESCVLFAREFQEQLANDRAVKISAVEKEFKFVEALEGTCERMLQYKLHKEKSDISRFAKEESNTMKALNELRSKGVKVELGIPYEMWDTPSVEIVTLKQNCEALLERYENDLEQWYNIRNRPLLEEYLCKKRVLKRTERDCMEISDNLEL
Length698
PositionMiddle
OrganismBrugia malayi (Filarial nematode worm)
KingdomMetazoa
Lineage
Aromaticity0.09
Grand average of hydropathy-0.423
Instability index39.79
Isoelectric point8.69
Molecular weight80822.06
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05688
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.33|      16|      19|     330|     345|       1
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  330-  345 (30.10/20.33)	SPKFENLGQQ.KAKLEF
  350-  366 (23.23/14.13)	SAEKELLGQKaKAVLEF
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.69|      15|      19|     281|     295|       3
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  281-  295 (27.53/15.43)	NEYIGRAFLGSHGIC
  298-  312 (27.16/15.14)	NEFAALRHISTWAVC
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.51|      18|      19|     476|     493|       4
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  476-  493 (31.11/20.50)	ITCTANAKFIEEQQCIQR
  497-  514 (30.39/19.86)	MTNRNGSSSIHNGKKLQR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     208.11|      68|     454|      75|     235|       5
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    5-   86 (106.21/65.05)	SFILKKKNRECRMLV..KNGQKYCGEHAIYDDQN...EDRIICPNDpRHTVNKSHLQKHLSSrcnsrlpevpwivKNFNLAGSPNGV
  175-  252 (101.90/147.24)	SYWMAKIAPKCRFLLieKMGSRNKFDNKIHKELDlvfLERLRCSVE.HLDLSKIDLIRDVDN........taavcKHFCGAATDFGI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05688 with Med31 domain of Kingdom Metazoa
Unable to open file!