<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05630

Description Uncharacterized protein
SequenceMSRVNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRPSSVPSSDHLSEAVGDNESKELFESFRVFCNRKSIQCKEVLLEDTDISKALIDTISTNTIELLVLGAPSRGGLVRRFRTTDVPSTVSKGAPQFCTVYIISKGKISSVRSATAPLAPNKAAIAAAAAAATTPRNQLQPQQQPHPQIMRSPERFSDSQPPRNYPPRPTSERPTAFGSHGAHHPMMDEDDIISPFTRAGKTYEPSKFQDSDISFVSSGRPSVERMFPTLYEDQDSASGIALGRFSDYDGRNSFASSYSSQSQGIDDHSFSSQSRLSDCTDDVEFEMRRLKLELKQTMEMYSSVCKEAMTAKQKAMELQRWKVEEQKKLEDSSMSSSPGEAVTSSSSMALMEMEQEKIREEALQKIAALEAQKRMSLQMERKKPEEKTLSSFGHTARYRRYTIEEIEEATNMFSESLKIGEGGYGPVYRCELDCTQVAIKVLKPDAAQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFPRGKSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRSIEKGTFAEMLDPAIPDWPLEQTLHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRAFAEQCMSPMMMFALRSTGGAGGGAGGGAGYVPRNSNSSGLSSSTQDMSEVSGFSGYESRSSTSSLGRI
Length798
PositionTail
OrganismGlycine max (Soybean) (Glycine hispida)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.433
Instability index53.73
Isoelectric point6.76
Molecular weight88110.17
Publications
PubMed=20075913

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05630
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      30.13|       8|      25|     183|     195|       1
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  183-  195 (10.17/19.51)	PRNqlQPqqqPHP
  210-  217 (19.97/10.98)	PRN..YP...PRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.23|      27|      50|      99|     125|       2
---------------------------------------------------------------------------
   99-  125 (41.90/23.61)	ISKALIDTISTNTIELLVL.GAPS..RGGL
  127-  150 (19.10/ 7.17)	......RRFRTTDVPSTVSkGAPQfcTVYI
  151-  173 (36.22/19.51)	ISKGKISSVRSATAPL.....APN..KAAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     132.24|      24|      57|     361|     384|       3
---------------------------------------------------------------------------
  330-  351 (31.01/17.99)	DVEFEMRRLKLELKQTME..MYSS
  361-  384 (41.30/26.24)	QKAMELQRWKVEEQKKLEDSSMSS
  393-  413 (27.84/15.44)	SSSMALMEM...EQEKIREEALQK
  420-  439 (32.08/18.85)	QKRMSLQM....ERKKPEEKTLSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.07|      20|      52|     251|     270|       4
---------------------------------------------------------------------------
  231-  250 (25.80/13.14)	HHPMMDED.DIISpFTRAGK.T
  251-  270 (37.56/22.50)	YEPSKFQD.SDIS.FVSSGRPS
  306-  325 (24.71/12.27)	Y.SSQSQGiDDHS.FSSQSRLS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05630 with Med32 domain of Kingdom Viridiplantae
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