<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05606
Description |
ATP-dependent DNA helicase |
Sequence | MRQGEANSTQGPKVNLLQHANALENFSSQAKFLSSTFLFSVPPKKPPHHAEPNPGTAGFVFRRSETIQGSHRVQVEKALTAHSSLQNSSRIYVQLGKTQVTPQLHEDRRTTSFHGRYENDSRICPDVTVTPIVNNHSSRGLDGLVNNHTNYTGQIIKSSNCMAVDIDDDDDAILANIDVDQIVEEHQSTCTPKPSISKFPPITPTADKDNFARQGDNVLPPELCLDCIHGYKLGFCPEAASHLQEMKDNLIAISNELLDNGENLNSTQIAKLRHDRSQLNKQIQQLEKYIHSGNLNEERQKSHFSASTAPPTSFVYETPQQTVLCNGSKRYDTQAYMGNETYGSSFQSLPSFSVDNCNMPLGSVGREAFIPKIIEVNYIEGSGDKRWSSYDFPWTKELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPALIRPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRVNHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCILYYNYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYCENDVDCRRLLQLAHFGEKFNSSTCQKTCDNCLKITSFIEKDVTEIANQLVELVKLTGQRFSSSHILEVYRGSLSQMVKKHRHETVSLHGAGKHLAKGEASRILHHLVVEDFLGEEVKKSDFYGSVSSILKVNEPKVRNLFAGQRIILRFPSSVKASKPGKSDATPAKGSLTSEKLNVMQIDPPSPQTEVDHLSYTMPCGC |
Length | 986 |
Position | Unknown |
Organism | Glycine max (Soybean) (Glycine hispida) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine>
Glycine subgen. Soja.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.436 |
Instability index | 44.64 |
Isoelectric point | 7.21 |
Molecular weight | 110597.11 |
Publications | PubMed=20075913
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro
ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
DNA repair GO:0006281 IEA:InterPro
DNA replication GO:0006260 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP05606
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.34| 20| 20| 628| 647| 1
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628- 647 (38.74/24.55) HFDECG..IIYCLSRMDCEKVA
649- 670 (31.60/18.66) KLQECGhkCAFYHGSMDPAQRA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.43| 22| 24| 819| 840| 2
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819- 840 (33.14/26.32) KITSFIEKDVTEI.ANQLVELVK
842- 864 (31.29/24.38) TGQRFSSSHILEVyRGSLSQMVK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.34| 21| 24| 726| 746| 3
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726- 746 (39.30/27.18) QRSSCILYYNYSDYIRVKHML
752- 772 (37.04/25.16) EQSSMTSGYNRSNMINSGRIL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.40| 11| 24| 487| 497| 4
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487- 497 (17.81/10.30) AEQQEILRELN
514- 524 (18.59/11.05) ARSDNLLRHLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.48| 28| 137| 406| 434| 5
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406- 434 (48.34/38.03) FGnHSFRPNQR..EIINASMSGCDVFVLMPT
546- 575 (48.15/32.56) WG.HDFRPDYQglGILKQKFPNTPVLALTAT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.15| 13| 25| 877| 889| 8
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877- 889 (22.32/14.92) GKHLAK....GEASRIL
899- 915 (15.82/ 8.39) GEEVKKsdfyGSVSSIL
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