<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05567

Description Uncharacterized protein
SequenceMELALALEWDDQVREGVLKKLKLWQQRNNKPPTAWVTELVEHFNTLGIALPCPELGELLVSQICFDNNHPLIWKFIHHALSSRLLFPLQILSLLSSNVLRHRHSHPHAFALFLPLLAQHAFSFLPTLSNNLKMVNSVDAVMRFSETYKIRDLELGHVFVLFFYDIVVALIDCVLIDWGFQVTFSEKSRLVTGGGGGDDEEDYMEIDRNMTTMTQSFEKSEQIRKRNSFTALEVLERLTESRKATILLQSVLLNMPEKFNCLQQRLQFLESLELASSELKSVNQVLTKVSASIRGVSRFDYCLRKHQLVGMLKASLRCNYRFCQSPCWVPFDIYMENAMDSRQIPTKSAIDVLTEAIKTLQILNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLCVLLCIVPLAIANVLRDDSEHNSSSVQVSMESEYRHEMKSGSSMKLGLISSVQVLGHFSGLLCPPTLVIDAANQAARKAASFIYNTMNGKGESGTGIHANTNTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVLSLSDSSPLEKSPWSIFMEGTPLNNTLINSLTVTPASSLVEIEKLYYIALNGSDVERPAAAKILCGASLSHGWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVVPAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLIRLWKFCRPPLDLCITELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSCVASALSGISTGNSIHQTANMILSMIYQKITKGGISSSNSSSPTTASSNACSSLMNSGEDNFQRPLLPAWEVLEALPFVLESILTACVHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAALIQSIESEIKAILTHVGVEVPNRSSVMIFQW
Length966
PositionTail
OrganismGlycine max (Soybean) (Glycine hispida)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.08
Grand average of hydropathy0.093
Instability index44.34
Isoelectric point6.46
Molecular weight106840.01
Publications
PubMed=20075913

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05567
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.99|      36|     151|     118|     155|       1
---------------------------------------------------------------------------
  118-  155 (60.64/43.24)	QHAFSFLPTL...SNNLKMVN........SVDAVMRFSetYKIRDLEL.G
  262-  309 (48.35/28.30)	QQRLQFLESLelaSSELKSVNqvltkvsaSIRGVSRFD..YCLRKHQLvG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.75|      22|     338|     561|     598|       5
---------------------------------------------------------------------------
  575-  598 (32.59/45.81)	SSLVE..IEKLyyIALNGSDVERPAA
  912-  935 (39.16/15.98)	SSEVTrgVWKL..VPMNGTDWPSPAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.78|      31|     338|     370|     412|       7
---------------------------------------------------------------------------
   21-   51 (57.68/31.64)	LKLW......QQRNNKPPTAWVTELVEHFNTLGIALP
  372-  408 (52.10/45.57)	LALWlsalrlVQRERDPPEGPIPHLVARLCVLLCIVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.58|      33|     332|     474|     508|       9
---------------------------------------------------------------------------
  474-  508 (52.20/35.95)	QAARKAASFIYNTMNGKGESGTgiHANTNTKAGGN
  809-  841 (55.38/32.14)	QTANMILSMIYQKITKGGISSS..NSSSPTTASSN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05567 with Med33 domain of Kingdom Viridiplantae
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