<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05551

Description "Uncharacterized protein, isoform C"
SequenceMVGERDRDREAVRWATGETTPLQNNNGVLQMVGQLHGGQAASQQQQQQQQQQSQQQQSKQQKLQQKQQQQQQQQQQQQQQQQQQQHPELFYQQHEAAARGLQLAGTADGGDNQPYYDTSGNVDWERAMGTGGASSYGCVGGAVTAAGGGAYNSGPTVAGGAVVANNRHLDYADGIGIAGPSAAPAAAHAAAAALGLGAAGGGGNVAAGPVAGAGGAVGSSTGAIGKEVRYAPFPVTSPTHSNPTTSQQTLAGIAGGSIGGPASSSLGGGGGSHAGISHSNTTGALQRTHSRSMSSIPPPEPFMIAQSKQMNSRVSINVGGVKHEVLWRTLERLPHTRLGRLRECTTHEAIIELCDDYSLVDNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHNLSQADVDGNSTEGESTSGRNPATTGMGCYKNYDHVANLRSSSMHQRRGSSSEKDAVPPYSFDNPNARQTSMMAMESYKREQQAKLLVQQQQQQQQQKLPPAAQMPAGGVANNLAMVAASSAATAVATSGSAGQENGEAGAAAASTKGEDDTSLASNQKGLPIQMMITPGEVAELRRQVALENLQNQRMDNLEQDVPVEFECCFCTTKDFKEYTDAEGVISLPTSDFHKPICQELRQAAANRHANQFGLLAPAAAAALPLVPAYTSASASAMMPIISQSSSTSSSYGTTTSTTIALPLEGTQRFGAPIASNFNHNYNNNFNTTTVGAGGVANGLLLFGNGNYGASGSNGNGNGNGNGNNNNNNNADLASVDSSDTYASCQTHPFLSQGDLTADFNDEACALDIDMDNLYINPLEKESCRGTHISSSTGFIVGLPPTMSASGLSMRAQVKKSASGDTALRNLAAGGISPLGDVYQSFDVQERGSRVSLNENSVPKHRKTRFQQSFTAMRPSPQASSTKPRARFEDTKLYDDNVRLDGGGLSGPSSSSGSSATGAAGSKKKRSAFMPAKSLATATKLINQRLFGIQNAGAKAKFESKHSSSIDSIDASPNLEHHRRSKSILKNKSDISRVLSDPESERLLADNMSGSGVSDNGTVMGESGSDYSPNKLPHSVLAKSISPPPLRHRSLMNQRSGPATLQSKPTKFQTPRYPEEQALRQVKPVLSRSSAAASASSDGRYDSSQTRDSSLDSETTFTSPARQPQGQEAPSKPQDKSPGVGEPRADMEGPGEGEGEANDEQRALLQPQNADEPAKSEGGEGSGGAT
Length1603
PositionKinase
OrganismDrosophila mojavensis (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila.
Aromaticity0.06
Grand average of hydropathy-0.508
Instability index49.15
Isoelectric point6.45
Molecular weight172009.45
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
voltage-gated potassium channel complex	GO:0008076	IEA:InterPro

GO - Biological Function
voltage-gated potassium channel activity	GO:0005249	IEA:InterPro

GO - Biological Process
protein homooligomerization	GO:0051260	IEA:InterPro
regulation of ion transmembrane transport	GO:0034765	IEA:UniProtKB-KW









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05551
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.41|      23|      24|      43|      65|       1
---------------------------------------------------------------------------
   43-   55 (20.84/ 8.96)	...........QQQQQQQQQQSQQ
   56-   79 (42.60/26.11)	QQSKQQKLQQkQQQQQQQQQQQQQ
  862-  881 (30.98/16.96)	KREQQAKLLV.QQQQQQQQQK...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      65.12|      17|      17|     129|     145|       2
---------------------------------------------------------------------------
  104-  120 (21.40/ 8.25)	AGTA....DGGDN..QPYYDTSG
  121-  141 (23.58/10.08)	NVDWeramGTGGA..SSYGCVGG
  208-  226 (20.14/ 7.20)	GPVA....GAGGAvgSSTGAIGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     411.59|     108|     119|    1207|    1324|       3
---------------------------------------------------------------------------
 1207- 1317 (172.32/109.91)	SSSTGfIVGLPPTMSASGLSMRAQVKKSASGDTALRNLA....AGGISPLGDVYQSFDVQERGSRVSLNEN.SVP.KHRKTRF..QQSFTAMRP....SPQASSTKPRARFEDTKLYDDNvrL
 1331- 1414 (112.54/69.88)	SSATG.AAGSKKKRSA...FMPA...KSLATATKLINQR....LFGIQNAG.AKAKFESKHSSSIDSIDASpNLE.HHRRSK....................SILKNKSDI..SRVLSD....
 1421- 1528 (126.73/72.42)	.........LADNMSGSGVSDNGTVMGESGSDYSPNKLPhsvlAKSISPPPLRHRSL.MNQRSGPATL..Q.SKPtKFQTPRYpeEQALRQVKPvlsrSSAAASASSDGRYDSSQTRDSS..L
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.24|      17|     120|     384|     402|       4
---------------------------------------------------------------------------
  384-  402 (27.19/31.83)	KLHIVDEMCVLAFSddLEY
  508-  524 (32.05/27.37)	QLAMVEAVCITWFT..LEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.59|      29|     134|     887|     915|       6
---------------------------------------------------------------------------
  887-  915 (48.71/23.08)	QMPAGGVANNLAMVAASSAAT....AVATSGSA
 1020- 1052 (42.39/19.16)	QAAANRHANQFGLLAPAAAAAlplvPAYTSASA
 1110- 1130 (27.48/ 9.92)	...AGGVANGLLLFGNGNYGA........SGS.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.19|      42|     133|     782|     823|       7
---------------------------------------------------------------------------
  782-  823 (74.80/37.99)	GHNLSQADVDGNSTEGESTSGRNPATTGMGC..YKNYDHVANLR
  916-  959 (64.39/31.72)	GQENGEAGAAAASTKGEDDTSLASNQKGLPIqmMITPGEVAELR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.26|      14|      15|     420|     434|       9
---------------------------------------------------------------------------
  420-  434 (20.08/19.06)	QRKENVHEEmRKEAE
  438-  451 (26.18/18.48)	QRDEEEFGE.GKCAE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05551 with Med12 domain of Kingdom Metazoa
Unable to open file!