<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05469

Description Uncharacterized protein
SequenceMDNYESALATYVEGLKYDPNNIDVIDGLRRCAACIKSSNGGHVEPVDLKEILGDFRSDDDLRSKLQRNMEEAAVFKKEASDERLRRIESERMARTSEDLYLNQVQQRKETEEYLSKVQEELQQLKVRQDEFIDELQKANEHNEDLQHQLSELSESRERYDQLLSEHDHLLHERNHAVREVDELRQRRGQILSVLLTAMHCEFSSSELERATENFNSSLKIGEGGFGCVYRGVLRNMAVAIKVLRPDGLQGRSQFEQEVAILSRVRHPNLVTLLGACSESSTLVYEFLPNGSLEDFLVCAEKRQTLTWQIRIQIIAEICSALIFLHENKPHPVVHGDLKPANILLDVNLVSKLSDFGISRLLIQSSSDNTTLYRTMHPVGTPMYMDPEFLATGEMTPRSDVYSFGIVVLRLLTGRPPVGIKKIVEDAMEEGDLNTIIDTSAGEWPDVHVQQLAYLALRCTELSRKCRPDLSGDLWRAVEAMRDATTLCSPSSSRSVLDENRTPSYFICPISQDVMNDPHVAADGFTYEGDCIRSWLSTGRETSPMTNLPLQHDELIPNLALRSAIQEWLQLQNTAL
Length575
PositionTail
OrganismBrachypodium distachyon (Purple false brome) (Trachynia distachya)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Brachypodieae> Brachypodium.
Aromaticity0.06
Grand average of hydropathy-0.417
Instability index52.99
Isoelectric point5.03
Molecular weight65242.94
Publications
PubMed=20148030

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05469
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     128.62|      29|      29|     136|     164|       1
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  105-  133 (42.63/31.31)	QQRKETEEYLSKVQEELQQLKVRQDEFID
  136-  164 (46.48/34.90)	QKANEHNEDLQHQLSELSESRERYDQLLS
  167-  192 (39.51/28.40)	DHLLHERN...HAVREVDELRQRRGQILS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.72|      17|     122|     410|     443|       2
---------------------------------------------------------------------------
   45-   61 (30.12/ 8.56)	PVDLKEILGDFRSDDDL
  416-  432 (29.60/28.86)	PVGIKKIVEDAMEEGDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.38|      21|     495|      18|      40|       3
---------------------------------------------------------------------------
   18-   40 (35.32/29.79)	DPNNidVIDGLRRCAACIKS..SNG
  516-  538 (36.06/23.37)	DPHV..AADGFTYEGDCIRSwlSTG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05469 with Med32 domain of Kingdom Viridiplantae
Unable to open file!