<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05461
Description |
Mediator of RNA polymerase II transcription subunit 9 |
Sequence | MDQHHPPQYGDPYRALVPSPQPDHLHALQYQQPQPQQVTPLPQQQHHSSLASHFHLLHLVTRLGDAIGTGTRDQTFDALVEELTSQFARCQQLLNSISGTLSSKSITVEGQQQSLEETRQLLDQRKDLITKYRSSVEDLLKGDTTR |
Length | 146 |
Position | Middle |
Organism | Brachypodium distachyon (Purple false brome) (Trachynia distachya) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Pooideae> Brachypodieae> Brachypodium.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.777 |
Instability index | 47.74 |
Isoelectric point | 6.10 |
Molecular weight | 16526.17 |
Publications | PubMed=20148030
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364145
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05461
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.20| 17| 19| 5| 23| 1
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5- 21 (35.32/18.35) HPPQYGDPY.RALVPSPQ
26- 43 (28.89/ 8.72) HALQYQQPQpQQVTPLPQ
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|