<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05457

Description Uncharacterized protein
SequenceMYLSAFSTSSHSGEPEAGKDSSTIVAVDRDKNSQQAAKWAVDRLLARGSTLQLVHVRTNQTEAGRGVDADAEMSQLFISYRGYCARKGMHLNEVILDNNDISKAIVDYATSHTITDIVVGASTRNTFIRRFRNPDVPTCLMKMAPDYCTVHVIHKGKAIQVKAAKGPAPFTTLPPKQNSQPNIESDPFARSSRDWRKFSQPSSPKSNRSSVDRNRPSVERNRPSVERLSAYSKAPTKDRHLLSGRQAPQRDFDDYIDFIAPPRPSVTRSSFSDDIDFPMSMELNSMDYGESLELSSYVSIESLSSAGKDVEAEMRRLRLELKQTMEMYNSACKEAVDAKQKAAQLSQMKVEESKKYEELRNSEEEALALVEMEKAKCRAALEAAEAAQKIAELEAQKRLRAEWKAKRETDERRRATDTDLRYRRYSIDDIEAATHKFDRALKIGEGGYGPVYKAVLDHTNVAIKILRPDASQGRQQFQQEIEILSSMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGNTKPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPGNILLDHNFVSKISDVGLARLVPQSIAEVTQYRMTSTAGTFCYIDPEYQQTGMLTTKSDIYSFGILLLQIITARSPMGLTHQVEDAIERGAFQEVLDQTVTDWPVEEALAFAQLALKCAELRKKDRPDLGKEIMPELNRLRNLGQEYEASHVSSTSTTYSSCAPYSFNNDDDVSIP
Length738
PositionTail
OrganismBrachypodium distachyon (Purple false brome) (Trachynia distachya)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Brachypodieae> Brachypodium.
Aromaticity0.07
Grand average of hydropathy-0.551
Instability index49.35
Isoelectric point6.48
Molecular weight83042.90
Publications
PubMed=20148030

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05457
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     446.11|     146|     183|       6|     165|       1
---------------------------------------------------------------------------
    6-  165 (225.65/163.30)	FSTSSHS....GEPEAGKdsSTIVAVDRDKNSQQAAKWAVDRLLARG.STLQLVHVRTNQTEAGRgvDADAEMSqlFIS.YRGYCARKGMHlnevilDNNDISKAI....VDYATSHTITDIV....VGASTRN..TFIRRFRNPDVPTclMKMAPDYCTVHVIHKGKAIQVKAAK
  188-  349 (220.46/128.78)	FARSSRDwrkfSQPSSPK..SNRSSVDRNRPSVERNRPSVERLSAYSkAPTKDRHLLSGRQAPQR..DFDDYID..FIApPRPSVTRSSFS......DDIDFPMSMelnsMDYGESLELSSYVsiesLSSAGKDveAEMRRLRLELKQT..MEMYNSACKEAVDAKQKAAQLSQMK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.19|      21|     301|     364|     398|       2
---------------------------------------------------------------------------
  364-  398 (24.68/39.61)	EEALALvemekakcraaleaAEAAQKIAELEAQKR
  668-  688 (36.51/22.01)	EEALAF..............AQLALKCAELRKKDR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05457 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AKGPAPFTTLPPKQNSQPNIESDPFARSSRDWRKFSQPSSPKSNRSSVDRNRPSVERNRPSVERLSAYSKAPTKDRHLLSGRQ
164
246










Molecular Recognition Features






MoRF SequenceStartStop




1) DFDDYIDFIAP
251
261