<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05445

Description "Uncharacterized protein, isoform B"
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
Length537
PositionKinase
OrganismDrosophila ananassae (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-1.173
Instability index63.83
Isoelectric point11.52
Molecular weight58037.00
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05445
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     557.89|      63|      63|     230|     292|       1
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   41-  103 (94.24/12.65)	GGNGQQNPQMNF.......MQQGPGGGGGAP...Q.GMPgqQQ.PQqwhnNP.QQQQPPQQYHNQYAPH.........QQNMQSN
  129-  171 (83.16/ 9.27)	QQQQQQQQGP...............AG.........GFN..PM.QQ....QPQAQQQ.QPGPQQQMNP..........NQMRQQQ
  207-  260 (101.97/15.01)	FMRGNMRPGMTPNQ....M.........NQM...NMGGQ..GM.PQ....NPMMQQQMQQGMVGMVNPN........GNQMMQTG
  261-  325 (106.82/16.49)	GGQGGNGVGVGVGV....GVGVGVGAGGNNP...NMGMG..GM.SQ....QGMMQQQPQQ......QPQqqvqfqnfQNQYQQQQ
  401-  464 (86.83/10.39)	RGQYMNQAP.NVTM....SNMMGPGPGQVPPyarQQAAG.gGK.PG....VLNTQQQFQQQQQQQLRHQ..........QMMQMQ
  465-  528 (84.88/ 9.80)	GMGGGGGGGMGAGPqqagGAG.GVGGGGGGV...GVGVG..GMvPQ....QQSMNQQQTPNLVAQLQ.R........QNMMGQ..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     148.84|      33|     181|     173|     206|       2
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    2-   38 (46.95/ 7.61)	NMQQfAPN...ANNMMQQnammQQQQMQQMggNPLQQQLN
  173-  205 (63.82/15.32)	NTQQ.NPQALAAFNALQQ....QNAQQQQM..NPNQQQQQ
  370-  393 (38.06/ 6.27)	N....NPDFMTAAAVAQQ....QQQQQQRG..VP......
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05445 with Med12 domain of Kingdom Metazoa
Unable to open file!