<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05444

Description "Uncharacterized protein, isoform D"
SequenceMDGNAQNMFHGNHQGDPYYRYDAAAAAAAAAAANPRAMGPPGGYPPRHRAPHPLQQQPQYPSYQPTAENLYGLGAADHQAAMGLGVGVGVGVGVGVGGMGDLSGWGAAPTGVPGQAAAYPGAGLGAYGHPQAAPPAQQQRQSNASAYRQHMPAYGQQEQQKLAPYGAQQGMMAGYGSQQPPTPQQQQQVQAQQQAQQVQQQQAQQVQQQQQSQQQARLPQHYPQAPGQHPLYPGVGAPAVQAGQPPTPQGYAHSPYGSPMQHQPGRGAPQHVGYGHSGLDPNQASAYGQHVPGAAPPGHHQQQLGAHQQQQLQSQQQAQQVQQQAQQQQQQPHVSLMQQQLPGAGLPPPHMGMPPSYGSHHQQQQQQQQAQQQQQQAAPPYMSKQAAAQLNSSPQYRAPFPQLSPQMSPRPPTMSPHPQMSPRPVGVSPAKPPAPQQAQAQQQVVQQPQQPSQHSIQGMVGLPSPRPQPPSSGAVGGAVGSGSKVPPPVAAPVNTLQALEQMVMPTQAHGLPPMDYPSAYRSAVGPRMPASPQQQQQQQHHQQWGSQHMAAMQQQQQAAAAQQQQQQAQQQAAAQQQQQQQQAAPQQQQAAMLQAQQQHHQQQMSMYGQAMGQQQQQQPQAPQQVVPPVAAQQQPPQQQQQQQQQQQQQQHQQQQQQSLNDQLQHSINDIVGGGNSSGSTTSSQSSQQQQQQLQQSLPSMHHLIQPTLEATQQTQAAQQQQQQQQPQAALTSPHHQQLQHQSPIHQQQSPHHQQQHTLPSYNQSQQQFDPFANILGDNQPPAAQHVSSPAHVSSPIPAQMQQQQSQQQQQQQQQVPPAQQQQQAQVPQQQQQQPPQPTTPSHHLSSILNETANSNDSSTLAVAANDSNNSSSNSSTNSIVNNQPTSVHDSNSQSSINSSSNNQQQLLMDNTNSHGGNSESAQHVGVDVGLFDNNSMSSNSAAVAAVASNASAAAAALLDSNSQSSNAEFEKNQSESDGLGLGGVVASEPELPQDESSISKTQETSLSTELPAVQEEQLEKPSDDVEQTQISQPLGDMNTSLSEDAKSADEVGEDKSGAVPPMEPPPPQQQQMPPHYPMAPGYDGQNQGHMPPMMPPYGGAPGMYPPYPMLHQQEIAALQQQIQEIYCMPPGHEHQHQEKLMRLQERLNLLQQHEVNDQCAGGGPQCVLFQSMPPMYGSNPLHNQQMVESPQVSSTTGRGRGKGANKPRKPRAKKGEKVAAVGQDLMDISSNVVVGQANATQSIPTTQLPVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKKKKPRKPRIPKDPNKPPRDRTPKSKKPKDPNDPNSTDSPAPTSKKRASTSKKSKKQYGDDGAEQTGEGSEVEDNKPLVPKAESADGEAETTSAVVGVDGESPDYDDIPVSKIPRSANEEEKEPEAGDETVDSVPDSAGDAASTPSRRDRKRSTARSRRNANSEEGGSARRNRGSLSAKALKKRRNRGRIVPESDGEDDTLDRTPPPSPPPDSELDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKEKKSSANTANSNAGSDAEKTEPQSGAEGEAGGQEAGEDKSNIAMDESSQLEASSSTSAAAAAAAEKERQSSTDAANAAMSSKPNYVYINTGDEDSMVVQYVLAVRMGKRELIPEKPKEKTPEPKEEKEEEKPEEPEKSDDGEEKPKAEGEDGEAPEGESKPEESKLETESSGMEVDKEETPAENEKSEEDDTSSPKKEEEMEVDEPAEKEAKPEEQAEDDKTEAKSETNEEEKSSDVETAEEAKETESPEEKMEVDETPGSPKPKEESNSEEKSSEETEEEKKDEESAEKEEEKEESKEGDETEKKEEAEKENKPEPVYIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEEEPFNPDFTEVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPMRCEWKSKKRPHPEQWKKLEKTPVYKAGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEFYYKTETGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMEINSEDSSNENSDEEGGIGLRSRRRKEKRDRNREKKGHDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDIDIEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNSKGRNGGKSNKDSTGPGTASGSNSGNTTPAHKSSALDGSDKDGGISASAVAAAVSNPTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYIQHEVIGDLVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAGDDLAVTNLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTGGDNKDSLLDPERPSSSGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRVITAYQRNYKKEELKQQQKAKLQALVSSTPPLSVPTTPTLQSMQMQLQSGTSGAGSSGSAAGQLDPSGRSLQALMQSQGASTSAAAAAAAAAAAAGGSAGQSQQGVGGAGGSVSVTGSGMPAMPSAADISLMLSILNTTDVNQLAQLDINKLAMYLVSMNNKMERQGKMELAAKERESQRLQLIPKKWNRREEYEFLRVLTGYGVDLHLSTPMGGNNASTLTPDWTKFKQMAHLERKSDETLTDYYKVFVTMCKRQAGLKLAESERGLEGIIEEIEKEHAKLILDRLELLSKLREVARNPQLEDRLKLCTMNADTPDWWEPGRHDKELITAVLKHGLYRSETFIFNDPNFSFGESEKRFIRELEAQIQRTIKLEAFNAEKAEKLAAAEKAAAAEKAAADKAVKNEVIDLDDELMTDESVIKKEGTPVKEEIKAEETADKKEAASPEPNTSEEEEPAKVESETEVKDDAVKAEDSEKETEPEAKAGEKEKSPAEADKDASETEESKASEEKMEVEEASIPAENGQEKAEITAESSPEKTPESEEKKSPEDKDKSVEVEEESAKMEVEEAPKADSEDKSPEKAESDAKESEEKTLPKPEEEKPEESKEESKEKSEDSDKEEKKPSAEAPETPEKASPATETEAAATAAKKPAGDQEILDLVAGPTDPDDDEVMKEKEKAVEEECKKQAAELKARFPDLEVIQPAAVKQQKLEKPKLEMCMIRWFKDFALERRIAHIVACVESGKWPVDSKYSAFASCKGVTDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQASQMQQVASSAAASSGATGLSQSLSQSKPVSASTLPLLDANNINAAVAAAVAAAAAGGNATSLSSLLPGMSLSAATGASAGGVGGLNVPSAGSGLGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESEIANMEALTGGSSGRGRGSGSSSALSGMQPPPAHQHASLSRQSSGQFSKPAVPALKTPPPSMGAPMDLSSSLPKMNMTEMLKSASNAVAIDLSEVQDFSMPSKKSSVHAALSSAFPSMGSKSKLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSSQQQSNQKPFTITVTTVPGKSKGASSSGGSGAGGSSSASGGGAAGGSGLSALQNMAMGGLSSKDSLNALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEMEQAMKLSSKYSANSPHDVKVNKWLSDMTSPLGDQLSIDYVGGGGAGSSSANSRRSNRQQSSSSQQSPSAAQLQKQQQQQQQQQQQQQQQSMAGPQNLTGEEPVPVINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSAPSPKPSSMDSYGSSAVKSHGGRPSSNSSNASSSSHTQQQQPNPAQSPAGNSGSSKKSSRQQSAAAAALDQAALQFGSLAGLNPNLLANLPGLGAFDPKNPLAAFDPKNPLLSMPFGGMPGMANIPGLGNLNNMNLFASLAGMGGLGNLAGMDTQSLAALMAAAGPSLGGLTGSSGAAGSSKNQGQSGGGSSNSSSSSASKKKQQQQQAQQQAQNEAAQLAAALSASSGGSGGGSSGGAGGKNSAPSASQLAAGFPFLFPNPSLLYPPMGLGGLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASNTSSTQSKSHQSQSKSSQSRNASAAANSAASLMNAMASMGGASTATTQSSSASGSGRGRQSSGRSQPQVTPTAADMAQLSSLLMPGADPLLLESLSRMSNMDLAQATRLMSSLGMPPLPGTSSSASGGGGGGSTSSSSASKRSSSQSANDQAKEHQKWLESLARGALPTDLAALQAFSQGKMPSTSSSNTATSSSSSSKSAKSSAAAAAAAAAAAQLPQIPGMTSDFSQAFLAEMAAQAMAAAGGSLPLSGPGSLASLAGLTGGSAGGSSGGASGGGSSSGNSSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSAGGSSSSSVAAAYAAALDAEHQQQQQQKSKRSRSEIHPTKEELAAAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMSAEQDKVTLTPLNASGSGSGSGSASGSGSSAAAAGLAANLPSQTTITIAPPISSGASTSSERSERSESRISLTITNAADAAKLPPPYEEADELIIQPILKKPAASGNPGSSHGGSVEDLDTAGNTSAANLSGSSSSSAAAAAAAAAAAAAEENRRSSNRLKRPRSGNEQGSVSAEGQPPEKRRELRSTRHTRSSADANSLNLSAGSESGAEERNE
Length5361
PositionKinase
OrganismDrosophila ananassae (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-0.832
Instability index63.50
Isoelectric point5.39
Molecular weight576089.43
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
nucleosome-dependent ATPase activity	GO:0070615	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05444
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|    1018.90|     104|     106|     632|     735|       1
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  177-  220 (41.87/ 6.41)	................................................................................................SQ...QP.ptPQQQQQVQA.....QQQAQ...Q.VQ..................QQ...QAQQVQQ.......QQQ............................S..QQQARLPQ
  221-  304 (91.71/23.80)	HYPQApgQH......PLYPGVGA.....PA.V.........Q..AGQPPTPQ..........GY..AHSP.Y.............G........spMQ...HQ...PGRGAPQHV.....GYGHS...G.LD..................PN...QASAYG..........QH...........VPGAAPPG.....H......HQQQL..
  305-  377 (67.91/15.49)	...GA..HQ........QQQLQSQQQAQQV.Q.........QqaQQQQQQPHvslmqqqlpgAG..LPPP.H.............M..........GM....P...PSYGSHHQQ.....QQQQQ...Q.AQ..................QQ...QQQA....................................................
  378-  501 (110.80/30.47)	APPYM..SK......QAAAQLNSSPQYRAPfP.........Q..LSPQMSPR..........PP..TMSP.H.............PqmsprpvgvsPA...KP...PAPQQAQAQ.....QQVVQ...Q.PQ..................QP...SQHSIQGmvglpspRPQPPSS......GAVGGAVGSGSKVPPPVAApvNTLQALEQ
  510-  594 (100.94/27.02)	GLPPM..DYpsayrsAVGPRMPA......S.P.........Q..QQQQQQHH..........QQ..WGSQ.H.............M......aamqQQ...QQ...AAAAQQQQQ.....QAQQQ...A.AA..................QQ...QQQ...........QQQ..........A..............APQQ..QQAAMLQ.
  595-  695 (164.34/49.16)	.AQQQ..HH........QQQMSMYGQ...A.M.........G..QQQQQQPQ..........APqqVVPPvA.............A..........QQ...QP...PQQQQQQQQ.....QQQQQ...Q.HQ..................QQ...QQQSLND.......QLQHSIN......DIVGGGNSSGSTTSSQSSQ..QQQQQLQQ
  696-  784 (121.73/34.28)	SLPSM..HH......LIQPTLEATQQTQAA.Q.........Q..QQQQQQPQ..........AA..LTSP.H.............H..........QQlqhQS...PIHQQQSPH.....HQQQHtlpS.YN..................QS...QQQ.F.D.......PF..A........NIL..GD...............NQPPAAQ
  785-  904 (110.36/30.31)	HVSSP..AH......VSSPIPAQMQQQQSQ.Q.........Q..QQQQQQ................V.PP.A.............Q..........QQ...QQaqvPQQQQQQPP.....QPTTP...S.HHlssilnetansndsstlaVA...ANDSNNS.......SSNSSTN......SIVNNQPTSVHDSNSQSSI..NSSSNNQQ
  905- 1008 (70.14/16.27)	QL.............LMDNTNSHGGNSESA.QhvgvdvglfD..NNSMSSNS..........AA..VAAV.A.............S..........NA...SA...AAAALLDSN.....SQSSN...A..E..................FE...KNQSESD.......GL..GLG......GVVASEPELPQDESS.ISK..TQETSLST
 1009- 1071 (49.25/ 8.98)	ELP..........................A.V.........Q..EEQLEKP.................SD.D.........................................................vEQ..................TQ...ISQPLGD........MNTSLSedaksaDEV.GEDKSGAVPPMEPPP..PQQQQ...
 1072- 1183 (89.85/23.15)	.MPP...HY......PMAPGYDG.....................QNQGHMP............P..MMPP.YggapgmyppypmlH..........QQ...EI...AALQQQIQEiycmpPGHEH...Q.HQ..................EKlmrLQERLNL.......LQQHEVN......DQCAGGGPQCVLFQSMPPM..YGSNPLHN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            10|     871.19|     102|     104|    1662|    1763|       2
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 1202- 1304 (58.50/15.99)	......................KGANKPRKP.RAKKG.EK....VAAVGQDlmdissnvvvgqanatqsiptTQLPV...SEDCV.....TQGAGDTSVVGMLEYSE.......gmgDLSQ..........................DVH..................SANELD......TStdgSGK.......K...........KKPR...KP................R
 1309- 1394 (91.30/29.10)	PN...KpPR.DRTPK...SKKPKD...PNDPNSTD.............S........................PAPT...SKKRA.....STSKKSKKQYG..DDGA..........EQTG..........................EGS..................EVEDNK......PL...VPK.......AESA...DGE.AETTSavvGV................D
 1395- 1537 (79.53/24.40)	GE...S.PDyDDIPVskiPRSANEEEK..EPEA...GDETvdsvPDSAGDA.....................ASTP......SRR.....DR.KRSTARSRRNANSE..........EGGSarrnrgslsakalkkrrnrgrivpesDGE..................DDTLDR......TP...PPS.......PPPDSELDSN.KRRSS...RNtqrkkyiddvmlrfsdD
 1538- 1659 (85.11/26.63)	EN...S.LL.VASPV...KKEKKSSANTANSNAGSDAEKT....EPQSGAE.....................GEAGGqeaGEDKSniamdESSQLEASSSTSAA..A..........AAAA..........................EKE..................RQSSTDaanaamSS...KPNyvyintgDEDSMVVQYVlAVRMG...KR................E
 1662- 1763 (172.74/61.65)	PE...K.PK.EKTPE...PKEEKEEEKPEEPEKSDDGEEK....PKAEGED.....................GEAPE...GESKP.....EESKLETESSGMEVDKE..........ETPA..........................ENE..................KSEEDD......TS...SPK.......KEEEMEVDEP.AEKEA...KP................E
 1764- 1828 (90.16/28.65)	EQ...A.ED.DKTEA...KSETNEEEKSSDVETAE..E....................................AKE...TES.P.....E....E...K.MEVD............ETP.............................................................G...SPK.......PKEESNSEEK.SSEET.....................E
 1829- 1872 (36.67/ 7.27)	EE...K.KD.EESAE...KEEEKEESK.....EGDETEKK....EEAEKEN................................KP.....EPVYIDVE.......................................................................................................................................
 3484- 3582 (123.09/41.81)	PV...K.EE.IKAEE...TADKKEAASP.EPNTSEE.EEP....AKVESE......................TEVKD...DAVKA.....EDSEKETEPEAKAGEKE..........KSPA..........................EAD..................KDASET......EE...SKA.......SEEKMEVEEA.SIPAE...NG................Q
 3583- 3647 (48.78/12.11)	EK...A.EI.TAESS...PEKTPESEEKKSPEDKD...................................................................................................................ksveveeesakmeveeapKADSED.............K.......SPEKAESD...AKES......................E
 3648- 3739 (85.31/26.71)	EKtlpK.PE.E..EK...PEESKE.ESKEKSEDSDKEEKK....PSAEAPE.....................TPEK.....ASPA.....T....ETEAAATAAKKPagdqeildlvAGPT..........................DPD..................DDEVMK......EK...EKA.......VEEE..................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     880.31|     103|     105|    4592|    4694|       3
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 4162- 4241 (64.53/14.31)	............................................SSKKPqiPP.....SVSVTP.......ANLQS..........SSS.QQQSNQK.PFTITVT......T..VPGKSK.GA................SS...............SGG.......SG.aGGSS..............sasgGGAAGGSGLSALQ..NM...A......MG
 4317- 4418 (99.31/25.95)	M.TSPL..........G.D.QLsidyvgGGGA....GSSS.ANSRRSNR..QQ.....SS..SS.......QQSPS..........AAQ.LQKQQQQ.QQQQQQQ......Q..QQQSMA.GPqnltgeepvpvI...NKQ...............TGK.......RL..GG..........................NKAPQLK..RL...M......QW
 4427- 4521 (108.18/28.92)	VDPKWLEQMqnpMSAPS.P.K..........P....SSMD.SYGSSAVK..SH.....GGRPSS.......NSSNA..........SSS.SHTQQQQ..............P..NPAQSP.A...................................GN.......S....GSS..................KKSSRQQSAAAAAldQA...AlqfgslAG
 4522- 4582 (61.69/13.36)	LNPNLLANL.........P.GL......GAFD....PKNPlAAFDPKNP.......................................................................lL................SMP...............FGG.......MP..GMAN.................iPGLGNLNNMNLFA..SL...A.......G
 4592- 4694 (171.17/50.01)	MDTQSLAAL...MAAAG.P.SL......GGLT....GSSG.AAGSSKNQ..GQ.....SGGGSS.......NSSSS..........SAS.KKKQQQQ.QAQQQAQ......N..EAAQLA.AA...........L...SAS...............SGG.......SG..GGSS..................GGAGGKNSAPSAS..QL...A......AG
 4697- 4821 (100.45/26.33)	FLFPNPSLL...YPPMG....L......GGLNpyslGSSG..LGSAYDQ.lAQqynllNGATSS.......ASNTS..........STQ.SKSHQSQ.SKSSQSR......NasAAANSA.AS...........LmnaMAS...............MGGastattqSS..SASG..................SGRGRQSSGRSQP..QVtptA......AD
 4847- 4953 (115.99/31.54)	MDLAQATRL...MSSLGmP.PL......PG.T....SSSA.SGGGGGGS..TS.....SSSASK.......RSSSQ..........SANdQAKEHQK.WLESLAR......G..ALPTDL.AA...........L...QAF...............SQG....kmpST..SSSN..................TATSSSSSSKSAK..SS...A......AA
 4984- 5080 (96.05/24.86)	QAMAAAGGS...LPLSG.PgSL......ASLA....GLTG.GSAGGSSG..GA.....SGGGSS.......SGNSS..........SSK.RQREQDAfKQQMDYY......T..KTLGLG.SG...........I...SLI...............PTS.......AG..GSSS..................SSVAAAYAAA...................
 5146- 5292 (62.94/13.78)	............MSAEQ.D.KV.......TLT....PLNA.SGSGSGSG..SA.....SGSGSSaaaaglaANLPSqttitiappiSSG.ASTSSER.SERSESRisltitN....AADA.AK...........L...PPPyeeadeliiqpilkkPAA.......SGnpGSSHggsvedldtagntsaanlSGSSSSSAAAAAA..AA...A........
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     113.14|      27|      27|    4102|    4128|       4
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 4046- 4079 (31.94/18.56)	PSMGAPMDLSSSLPKMnmteMLKsasNAVAIDLS
 4102- 4128 (47.02/31.96)	PSMGSKSKLDDTLNKL....MKK...NNCTIEEP
 4131- 4158 (34.17/20.54)	GKEKKRKKLDEIVLGL...sAAK...EQKTFPDP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     249.83|      58|      58|    3076|    3133|       5
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 2991- 3025 (36.24/13.58)	.......................TT..TTKDSDSTKL....TGGDNKDSL...LDPERPSSS..GLdeE
 3026- 3073 (43.59/18.35)	E.....SVAGSYPP.TVaavedATTmwPSMQDLNTRLRRVIT.AYQRNYKKEELK..............
 3076- 3133 (95.10/51.77)	QKAKLQALVSSTPPLSV.....PTT..PTLQSMQMQLQSGTSGAGSSGSAAGQLDPSGRSLQ..AL..M
 3136- 3190 (74.89/38.66)	QGASTSAAAAAAAAAAA.....AGG..SAGQS.....QQGVGGAGGSVSVTGSGMPAMPSAAdiSL..M
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     123.69|      25|      34|    2765|    2789|       6
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 2657- 2689 (25.15/ 9.76)	.REKKGHDEYIPRERDAlaalgleeiQYGNWAKS
 2692- 2714 (27.77/11.66)	FKVEKGLLSF.GWGRWS.........ELLELGQ.
 2765- 2789 (43.42/23.00)	SRDHSGLHNLVPRGRNS.........KGRNGGKS
 2790- 2807 (27.35/11.35)	NKDSTG.....P.GTAS..........GSNSGNT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.74|      14|      34|    2094|    2112|       7
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 2094- 2112 (20.33/30.18)	MNVVvyhgsVTSKQMI.QDY
 2130- 2144 (21.41/13.72)	FNVL.....ITTFEMIvTDY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     262.03|      62|      63|    3889|    3951|       8
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 3789- 3833 (46.47/17.19)	......................IAHIVA.CVESGK........WPVD.........SKY.SAF.A.SCKGVTDLsialheSIPHL.SSL
 3837- 3888 (51.57/20.00)	STTPdvitiTTDqgvTKHLQASQMQQVAsSAAASSGATGLS.....Q.........SLS.QSK...................PVS...A
 3889- 3951 (95.19/47.64)	STLP.....LLD...ANNINAAVAAAVA.AAAAGGNATSLSSLLPGM.........SLS.AATGA.SAGGVGGL......NVPSAgSGL
 3977- 4044 (68.80/29.26)	STMA.....PKD...WESEIANMEALTG.GSSGRGRGSGSSSALSGMqpppahqhaSLSrQSSGQfSKPAVPAL......KTP......
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.88|      22|      33|    5303|    5330|       9
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 5296- 5317 (37.80/16.09)	AE....ENRRSSNRLKRPRSGNEQGS
 5320- 5345 (31.08/27.74)	AEgqppEKRRELRSTRHTRSSADANS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.20|      17|      33|    2573|    2603|      10
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 2576- 2595 (28.42/44.44)	IDDPDfwtKWAKKVDIDPDA
 2840- 2856 (34.77/10.25)	IHDPN...HWSKKEKYDADA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.30|      19|      24|    2015|    2038|      11
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 1995- 2013 (34.78/21.19)	WKSKK..RPHP.E..QWKKLEKTP
 2015- 2038 (24.52/32.08)	YKAGNslRPYQlEglNWLKFSWYN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.92|      70|      80|      22|      93|      12
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   22-   93 (119.96/67.05)	DAAAAAAAAAAANPRAMGPPGG....YPPRHRAPhPLQQQPQY..PSYQPTAENlYGLGAADHQAAMGLGVGVGVGVG
  101-  176 (122.95/61.33)	DLSGWGAAPTGVPGQAAAYPGAglgaYGHPQAAP.PAQQQRQSnaSAYRQHMPA.YGQQEQQKLAPYGAQQGMMAGYG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.33|      15|      63|    2535|    2549|      13
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 2535- 2549 (27.48/20.28)	CEED.....IDSILKRRTQV
 2596- 2615 (21.85/14.19)	CERDetedlVLSEPRRRTQI
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.55|      10|     152|    4955|    4964|      14
---------------------------------------------------------------------------
 4955- 4964 (18.24/ 8.40)	AAAAAAAQLP
 5108- 5117 (18.31/ 8.47)	AAAALAAGLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     163.46|      56|      62|    2183|    2242|      15
---------------------------------------------------------------------------
 2171- 2214 (47.18/39.42)	..............LEGLRQLNL.EHR.....VLLSGTPLQNNISELfSLLNfLEPSQFSSQEE
 2217- 2276 (82.11/61.22)	SEFGSLRTEEEVNKLQALLKPMM.LRR.lkddVEKSLAPKEETIIEV.ELTN.IQKKYYRGILE
 2277- 2317 (34.17/13.98)	QNFSFLKKGTTSANIPNLMNTMMeLRKccihpYLLNGAEEQ.......................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     162.01|      44|     454|    2907|    2952|      16
---------------------------------------------------------------------------
 2907- 2952 (88.02/57.37)	RPPPTPDQV........PSSWWNPICCDKSLLVGTYKHGceMYRQ...MRADPNLCF
 3356- 3410 (73.99/41.50)	RNPQLEDRLklctmnadTPDWWEPGRHDKELITAVLKHG..LYRSetfIFNDPNFSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.84|      20|      30|    1938|    1963|      17
---------------------------------------------------------------------------
 1938- 1963 (22.69/32.64)	LDMSVhtDENSGEttkHYLvKWKSLP
 1971- 1990 (35.15/21.79)	LEEDV..DNDKIE...QYL.RFNKIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.68|      22|      29|    1877|    1898|      18
---------------------------------------------------------------------------
 1877- 1898 (41.73/25.55)	KYRNF.....SYLHCEWRTEEELLKGD
 1904- 1930 (33.95/19.33)	KIRRFqqkqsQQLNIFENIEEEPFNPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.96|      20|      49|    2389|    2417|      19
---------------------------------------------------------------------------
 2389- 2410 (31.81/32.20)	DGRIRGNLrqEAIDR...YS...KPGSD
 2420- 2445 (26.14/ 6.16)	AGGLGINL..TAADTviiYDsdwNPQND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.78|      23|     112|    2343|    2372|      20
---------------------------------------------------------------------------
 2343- 2368 (31.16/31.20)	KMVLIDKLLPklKaNGHRVLIFSQ..MV
 2459- 2483 (36.62/30.95)	KMVKIYRLLC..R.NTYEREMFDKasMK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.05|      17|      23|    3266|    3288|      23
---------------------------------------------------------------------------
 3266- 3286 (25.95/31.02)	HLSTpmggNNASTLTPDWTKF
 3291- 3307 (30.10/13.56)	HLER....KSDETLTDYYKVF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.29|      10|      23|    3432|    3441|      24
---------------------------------------------------------------------------
 3432- 3441 (16.64/ 7.95)	EAFNAEKAEK
 3452- 3461 (15.66/ 7.03)	EKAAADKAVK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05444 with Med12 domain of Kingdom Metazoa
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