<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05442

Description "Uncharacterized protein, isoform C"
SequenceMDGNAQNMFHGNHQGDPYYRYDAAAAAAAAAAANPRAMGPPGGYPPRHRAPHPLQQQPQYPSYQPTAENLYGLGAADHQAAMGLGVGVGVGVGVGVGGMGDLSGWGAAPTGVPGQAAAYPGAGLGAYGHPQAAPPAQQQRQSNASAYRQHMPAYGQQEQQKLAPYGAQQGMMAGYGSQQPPTPQQQQQVQAQQQAQQVQQQQAQQVQQQQQSQQQARLPQHYPQAPGQHPLYPGVGAPAVQAGQPPTPQGYAHSPYGSPMQHQPGRGAPQHVGYGHSGLDPNQASAYGQHVPGAAPPGHHQQQLGAHQQQQLQSQQQAQQVQQQAQQQQQQPHVSLMQQQLPGAGLPPPHMGMPPSYGSHHQQQQQQQQAQQQQQQAAPPYMSKQAAAQLNSSPQYRAPFPQLSPQMSPRPPTMSPHPQMSPRPVGVSPAKPPAPQQAQAQQQVVQQPQQPSQHSIQGMVGLPSPRPQPPSSGAVGGAVGSGSKVPPPVAAPVNTLQALEQMVMPTQAHGLPPMDYPSAYRSAVGPRMPASPQQQQQQQHHQQWGSQHMAAMQQQQQAAAAQQQQQQAQQQAAAQQQQQQQQAAPQQQQAAMLQAQQQHHQQQMSMYGQAMGQQQQQQPQAPQQVVPPVAAQQQPPQQQQQQQQQQQQQQHQQQQQQSLNDQLQHSINDIVGGGNSSGSTTSSQSSQQQQQQLQQSLPSMHHLIQPTLEATQQTQAAQQQQQQQQPQAALTSPHHQQLQHQSPIHQQQSPHHQQQHTLPSYNQSQQQFDPFANILGDNQPPAAQHVSSPAHVSSPIPAQMQQQQSQQQQQQQQQVPPAQQQQQAQVPQQQQQQPPQPTTPSHHLSSILNETANSNDSSTLAVAANDSNNSSSNSSTNSIVNNQPTSVHDSNSQSSINSSSNNQQQLLMDNTNSHGGNSESAQHVGVDVGLFDNNSMSSNSAAVAAVASNASAAAAALLDSNSQSSNAEFEKNQSESDGLGLGGVVASEPELPQDESSISKTQETSLSTELPAVQEEQLEKPSDDVEQTQISQPLGDMNTSLSEDAKSADEVGEDKSGAVPPMEPPPPQQQQMPPHYPMAPGYDGQNQGHMPPMMPPYGGAPGMYPPYPMLHQQEIAALQQQIQEIYCMPPGHEHQHQEKLMRLQERLNLLQQHEVNDQCAGGGPQCVLFQSMPPMYGSNPLHNQQMVESPQVSSTTGRGRGKGANKPRKPRAKKGEKVAAVGQDLMDISSNVVVGQANATQSIPTTQLPVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKKKKPRKPRIPKDPNKPPRDRTPKSKKPKDPNDPNSTDSPAPTSKKRASTSKKSKKQYGDDGAEQTGEGSEVEDNKPLVPKAESADGEAETTSAVVGVDGESPDYDDIPVSKIPRSANEEEKEPEAGDETVDSVPDSAGDAASTPSRRDRKRSTARSRRNANSEEGGSARRNRGSLSAKALKKRRNRGRIVPESDGEDDTLDRTPPPSPPPDSELDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKEKKSSANTANSNAGSDAEKTEPQSGAEGEAGGQEAGEDKSNIAMDESSQLEASSSTSAAAAAAAEKERQSSTDAANAAMSSKPNYVYINTGDEDSMVVQYVLAVRMGKRELIPEKPKEKTPEPKEEKEEEKPEEPEKSDDGEEKPKAEGEDGEAPEGESKPEESKLETESSGMEVDKEETPAENEKSEEDDTSSPKKEEEMEVDEPAEKEAKPEEQAEDDKTEAKSETNEEEKSSDVETAEEAKETESPEEKMEVDETPGSPKPKEESNSEEKSSEETEEEKKDEESAEKEEEKEESKEGDETEKKEEAEKENKPEPVYIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEEEPFNPDFTEVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPMRCEWKSKKRPHPEQWKKLEKTPVYKAGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEFYYKTETGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMEINSEDSSNENSDEEGGIGLRSRRRKEKRDRNREKKGHDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDIDIEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKDSTGPGTASGSNSGNTTPAHKSSALDGSDKDGGISASAVAAAVSNPTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYIQHEVIGDLVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAGDDLAVTNLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTGGDNKDSLLDPERPSSSGKSSHSDSATGTSDKSQAKANGSNNELESAAASASESSSKSKANPSPGNGSDVDATQQDASSEKATESADTSDPDTDNHKNDATVSASGSSGDPADSSSSSQEVGGQAEAEVKTVASNESDNDESEQNQKSKEIEKESKKDDPKEPTAGAAPAGEAGKDDAAIARAEGDNAESCTNNATTNITTTTTTITNTTTTTTTNTTTTTTTNNPSSKAANSKGQNNSTDNANSNSNLGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRVITAYQRNYKKEELKQQQKAKLQALVSSTPPLSVPTTPTLQSMQMQLQSGTSGAGSSGSAAGQLDPSGRSLQALMQSQGASTSAAAAAAAAAAAAGGSAGQSQQGVGGAGGSVSVTGSGMPAMPSAADISLMLSILNTTDVNQLAQLDINKLAMYLVSMNNKMERQGKMELAAKERESQRLQLIPKKWNRREEYEFLRVLTGYGVDLHLSTPMGGNNASTLTPDWTKFKQMAHLERKSDETLTDYYKVFVTMCKRQAGLKLAESERGLEGIIEEIEKEHAKLILDRLELLSKLREVARNPQLEDRLKLCTMNADTPDWWEPGRHDKELITAVLKHGLYRSETFIFNDPNFSFGESEKRFIRELEAQIQRTIKLEAFNAEKAEKLAAAEKAAAAEKAAADKAVKNEVIDLDDELMTDESVIKKEGTPVKEEIKAEETADKKEAASPEPNTSEEEEPAKVESETEVKDDAVKAEDSEKETEPEAKAGEKEKSPAEADKDASETEESKASEEKMEVEEASIPAENGQEKAEITAESSPEKTPESEEKKSPEDKDKSVEVEEESAKMEVEEAPKADSEDKSPEKAESDAKESEEKTLPKPEEEKPEESKEESKEKSEDSDKEEKKPSAEAPETPEKASPATETEAAATAAKKPAGDQEILDLVAGPTDPDDDEVMKEKEKAVEEECKKQAAELKARFPDLEVIQPAAVKQQKLEKPKLEMCMIRWFKDFALERRIAHIVACVESGKWPVDSKYSAFASCKGVTDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQASQMQQVASSAAASSGATGLSQSLSQSKPVSASTLPLLDANNINAAVAAAVAAAAAGGNATSLSSLLPGMSLSAATGASAGGVGGLNVPSAGSGLGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESEIANMEALTGGSSGRGRGSGSSSALSGMQPPPAHQHASLSRQSSGQFSKPAVPALKTPPPSMGAPMDLSSSLPKMNMTEMLKSASNAVAIDLSEVQDFSMPSKKSSVHAALSSAFPSMGSKSKLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSSQQQSNQKPFTITVTTVPGKSKGASSSGGSGAGGSSSASGGGAAGGSGLSALQNMAMGGLSSKDSLNALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEMEQAMKLSSKYSANSPHDVKVNKWLSDMTSPLGDQLSIDYVGGGGAGSSSANSRRSNRQQSSSSQQSPSAAQLQKQQQQQQQQQQQQQQQSMAGPQNLTGEEPVPVINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSAPSPKPSSMDSYGSSAVKSHGGRPSSNSSNASSSSHTQQQQPNPAQSPAGNSGSSKKSSRQQSAAAAALDQAALQFGSLAGLNPNLLANLPGLGAFDPKNPLAAFDPKNPLLSMPFGGMPGMANIPGLGNLNNMNLFASLAGMGGLGNLAGMDTQSLAALMAAAGPSLGGLTGSSGAAGSSKNQGQSGGGSSNSSSSSASKKKQQQQQAQQQAQNEAAQLAAALSASSGGSGGGSSGGAGGKNSAPSASQLAAGFPFLFPNPSLLYPPMGLGGLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASNTSSTQSKSHQSQSKSSQSRNASAAANSAASLMNAMASMGGASTATTQSSSASGSGRGRQSSGRSQPQVTPTAADMAQLSSLLMPGADPLLLESLSRMSNMDLAQATRLMSSLGMPPLPGTSSSASGGGGGGSTSSSSASKRSSSQSANDQAKEHQKWLESLARGALPTDLAALQAFSQGKMPSTSSSNTATSSSSSSKSAKSSAAAAAAAAAAAQLPQIPGMTSDFSQAFLAEMAAQAMAAAGGSLPLSGPGSLASLAGLTGGSAGGSSGGASGGGSSSGNSSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSAGGSSSSSVAAAYAAALDAEHQQQQQQKSKRSRSEIHPTKEELAAAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMSAEQDKVTLTPLNASGSGSGSGSASGSGSSAAAAGLAANLPSQTTITIAPPISSGASTSSERSERSESRISLTITNAADAAKLPPPYEEADELIIQPILKKPAASGNPGSSHGGSVEDLDTAGNTSAANLSGSSSSSAAAAAAAAAAAAAEENRRSSNRLKRPRSGNEQGSVSAEGQPPEKRRELRSTRHTRSSADANSLNLSAGSESGAEERNE
Length5588
PositionKinase
OrganismDrosophila ananassae (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-0.848
Instability index62.44
Isoelectric point5.28
Molecular weight598795.21
Publications
PubMed=17994087

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:EnsemblMetazoa

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
nucleosome-dependent ATPase activity	GO:0070615	IEA:InterPro

GO - Biological Process
axon guidance	GO:0007411	IEA:EnsemblMetazoa
blastoderm segmentation	GO:0007350	IEA:EnsemblMetazoa
determination of adult lifespan	GO:0008340	IEA:EnsemblMetazoa
heart development	GO:0007507	IEA:EnsemblMetazoa
imaginal disc-derived wing morphogenesis	GO:0007476	IEA:EnsemblMetazoa
negative regulation of transcription by RNA polymerase II	GO:0000122	IEA:EnsemblMetazoa
neuron remodeling	GO:0016322	IEA:EnsemblMetazoa
positive regulation of border follicle cell migration	GO:1903688	IEA:EnsemblMetazoa
positive regulation of organ growth	GO:0046622	IEA:EnsemblMetazoa
positive regulation of receptor localization to synapse	GO:1902685	IEA:EnsemblMetazoa
regulation of synaptic growth at neuromuscular junction	GO:0008582	IEA:EnsemblMetazoa
segment specification	GO:0007379	IEA:EnsemblMetazoa
short-term memory	GO:0007614	IEA:EnsemblMetazoa









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05442
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            12|     438.98|      31|      31|     536|     566|       1
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   38-   64 (33.91/ 8.81)	..MGPPGGYPPRH........RAP.........H.......PLQ.....Q.Q.......PQ.YPS....Y..Q
  149-  177 (32.07/ 7.84)	QHMPAYGQQEQ..............................QKL.apygA.Q.......QGMMAG....YG.S
  306-  331 (31.86/ 7.73)	....AHQQQQ..L........QSQ.........Q.......QAQ.....QvQ.......QQAQQQ....QQ.Q
  360-  383 (40.61/12.34)	HH....QQQQQ............Q.........Q.......QAQ....qQ.Q.......QQAAPP....YM.S
  428-  456 (37.72/10.82)	S..PAKPPAPQQA........QAQ.........Q.......QVV.....Q.Q.......PQQPSQ....HS.I
  547-  574 (48.07/16.28)	QHMAAMQQQQQAA........AAQ.........Q.......QQQ.....QaQ.......QQA........A.A
  575-  608 (37.65/10.78)	Q.....QQQQQQQ........AAP.........Q.......QQQaamlqA.Q.......QQHHQQqmsmYG..
  609-  644 (37.93/10.93)	QAMGQQQQQQPQApqqvvppvAAQ.........Q.......QPP.....Q.Q.......QQQQQQ........
  739-  783 (30.69/ 7.11)	QHQSPIHQQQSPH........HQQ.........QhtlpsynQSQ.....Q.QfdpfaniLGDNQP....PA.A
  784-  812 (40.32/12.19)	QHVSSPAHVSSPI........PAQ.........M.......QQQ.....Q.S.......QQQQQQ.......Q
  813-  832 (29.09/ 6.27)	QQVPPAQQQQQAQ........VPQ.........Q.......QQQ.............................
 1060- 1100 (39.08/11.54)	PPMEPPPPQQQQM........PPHypmapgydgQ.......NQG.....H.M.......PPMMPP....YGgA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|     614.94|      64|      64|    3774|    3837|       2
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 1284- 1335 (52.36/17.41)	.AN.ELDTS.TD.GSgKKKKPRK.PRIPKDPNK....PP......................RDRT.PKS.......KKP.....KD.....PNDP.......NS.....tDSP
 1336- 1419 (49.61/16.06)	APT.SKKR.....AS.TSKKSKK.QYGDDGA.......EQ..TGEGSEVEdnkplvpKAESADGE.AETtsavvgvDGE.....SPdyddiPVSKiprsaneEE......KEP
 1554- 1607 (39.06/10.90)	.SA.NTANS.NA.GS.D....................AEKtePQSGAEGE.......AGGQEAGE.DKS...niamDES.....SQ.....LEAS.......SS......TSA
 1679- 1730 (51.37/16.92)	EKPeEPEKS.DDgEE.KPKAEGEdGEAPEGESK....PE........E............S.KLE.TES.......SGM.....EV.......DK........E......ETP
 1731- 1791 (71.87/26.95)	AEN.EKSEE.DD.TS.SPKKEEE.MEVDEPAEK....EAK..PEEQAEDD.......KTEAKSET.NEE.......EKS.....SD.....VETA.......EE.........
 1794- 1841 (43.04/12.85)	..........ET.ES.PEE...K.MEVDET..P...gSPK..PKEESNSE.......EKSSEETEeEKK.......DEE.....SA.....E..K.......EE.........
 3670- 3727 (58.44/20.38)	AAA.EKAAA....AE.KAAADKA.VKNEVIDLD....DEL..MTDESVI...........KKEGT.PVK.......EEI.....KA.....EETA.......DK......KEA
 3728- 3776 (66.85/24.49)	ASP.EPNTS.EE.EE.PAKVESE.TEVKDDAVK....AE........D............S.EKE.TEP.......EAK.....AG.......EK........E......KSP
 3777- 3837 (84.46/33.10)	AEA.DKDAS.ET.EE.SKASEEK.MEVEEASIP....AEN..GQEKAEIT.......AESSPEKT.PES.......EEK.....KS.....PEDK.......DK.........
 3838- 3897 (49.47/16.00)	........SvEV.EE.ESA...K.MEVEEA..PkadsEDK..SPEKAESD.......AKESEEKTlPKP.......EEE.....KP.....EESK.......EE...skeKS.
 3898- 3961 (48.43/15.48)	......EDS.DK.EE.KKPSAEA.PETPEKASP....A........TETE.......AAATAAKK.PAG.......DQEildlvAG.....PTDP.......DDdevmkeKEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            10|     588.93|      65|      65|    5279|    5343|       3
---------------------------------------------------------------------------
 4688- 4718 (45.15/11.26)	G.GRP........SSNSSNA.......SSS...SHTQ...........QQQPNPAQ.............................................................................................SP..AG.N
 4855- 4895 (60.77/17.81)	G.GGS........SNSSSS..........SA..SKKK...........QQQQQAQQQAQNE....AAQLAAA.................................................L......................SA........S.S
 4896- 4949 (57.46/16.42)	G.GSG........GGSSGGAggknsapSASQLAAGFP................FLFPNPSLLYP.......PMGLGGL..........................nPY............SL................................GS.S
 4950- 5012 (48.15/12.52)	GlGSAydqlaqqyNLLNGAT.......SSASNTSSTQ...........S....KSHQSQSKSS....QSRNASAAAN..........................................SAA......................SL...MNamAS.M
 5013- 5103 (51.00/13.72)	G.GAS....tattQSSSASG.......SGRG.................RQS...SGRSQPQVTPT...AADMAQLSSL.L.......................M.PGadpllleslsrmSNMdlaqatrlmsslgmpplpgtssSA...SG..GG.G
 5171- 5239 (69.01/21.27)	S.KSA........KSSAAAA.......AAAAAAAQLP...........QIPGMTSDFSQAFL.A..EMAAQAMAAAGG.S...................lplsG.PG............SLA......................SLaglTG..GS.A
 5240- 5292 (69.67/21.54)	G.GSS........GGASGGG.......SSSGNSSSSK...........RQREQDAFKQQMDYYTK.............tL.......................G.LG............SGI......................SL...IP..TS.A
 5293- 5359 (89.21/29.74)	G.GSS........SSSVAAA.......YAAALDAEHQ...........QQQQQKSKRSRSEIHPTKEELAAAALAAGLpL.......................N.LG............ASM......................SS...IE..KSlR
 5360- 5397 (49.39/13.04)	G.GSS........SSS.SST........PAPMSAEQD...........KVTLTPLNASGS..............................................G............SG........................S.......GS.A
 5398- 5485 (49.11/12.92)	S.GSG........SSAAAAG.......LAANLPSQTTitiappissgaSTSSERSERSESRISLTITN...AADAAKL..pppyeeadeliiqpilkkpaasgN.PG............S..................................S.H
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     323.59|      61|      65|    2999|    3059|       4
---------------------------------------------------------------------------
 2782- 2828 (37.81/12.53)	.....GKSNKDST.GPgtASGSNSGNTTpaHKSS.......ALDGSDK.....DGGISASA...........VAAA...........
 2976- 2997 (28.84/ 7.41)	D....DGDE...V.................DDDG.......TTTTKD..................................SDSTKL
 2998- 3058 (93.13/44.10)	T....GGDNKDSLLDP..ERPSSSGKSS..HSDS.......ATGTSDKSQAKANGSNNELE...........SAAASASESSSKSKA
 3059- 3106 (56.34/23.11)	N....PSPGNGSDVDA..TQQDAS.......SEK.......ATESADTSDPDTDNHKND..............ATVSASGSS.....
 3108- 3176 (38.65/13.01)	..............DP..ADSSSSSQEV..GGQAeaevktvASNESDNDESEQNQKSKEIEkeskkddpkepTAGAAPAGEAGKDDA
 3177- 3241 (68.83/30.24)	AiaraEGDNAESCTNN..ATTNITTTTT..TITN.......TTTTTTTNTTTTTTTNNPSS...........KAANSKGQNNSTDNA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     196.17|      19|      65|     646|     664|       5
---------------------------------------------------------------------------
  179-  192 (26.82/ 6.88)	QPPTPQQQQQVQA........Q
  193-  207 (25.96/ 6.36)	QQAQQVQQQQAQ....Q...VQ
  284-  301 (28.12/ 7.67)	ASA.YGQHVPGAAPPGH...HQ
  403-  419 (26.05/ 6.41)	LSPQMSPRPPTMS.P.H...PQ
  646-  664 (32.49/10.30)	QQQQQHQQQQQQSLNDQ...LQ
  684-  705 (26.94/ 6.95)	QSSQQQQQQLQQSLPSMhhlIQ
  712-  727 (29.80/ 8.68)	QQTQAAQQQQQQ...QQ...PQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     157.44|      28|      29|     867|     894|       6
---------------------------------------------------------------------------
  867-  894 (48.68/20.16)	SNNSSSNS.STNSIVNNQPTSVH....DSNSQS
  895-  920 (39.71/15.03)	SINSSSNN.QQQLLMDNTN.S.H....GGNSES
  933-  964 (34.13/11.83)	NNSMSSNS.AAVAAVASNASAAAaallDSNSQS
  971-  999 (34.93/12.29)	KNQSESDGlGLGGVVASEPELPQ....DESSIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.00|      20|      24|    4746|    4769|       7
---------------------------------------------------------------------------
 4746- 4765 (37.61/17.14)	LAGLNPNL.........LANLPGLGAFDP
 4772- 4799 (22.51/11.59)	FDPKNPLLsmpfggmpgMANIPGLGNLN.
 4800- 4815 (22.88/ 8.16)	....NMNL.........FASLAGMGGLGN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.14|      21|      24|    4225|    4245|       8
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 4223- 4243 (34.43/14.59)	GGSSGRGRGSGSSSALSGMQP
 4272- 4290 (27.89/ 9.87)	PPSM..GAPMDLSSSLPKMNM
 4433- 4451 (25.81/ 8.37)	GASSSGGSGAGGSSSASG..G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     115.13|      26|      29|    3320|    3346|       9
---------------------------------------------------------------------------
 3320- 3346 (44.31/25.95)	PTTPTLQSMqMQLQSGTSGAGSS....GSAA
 3351- 3372 (37.17/16.42)	PSGRSLQAL.MQSQ....GASTS....AAAA
 3380- 3405 (33.65/13.91)	AGGSAGQS.....QQGVGGAGGSvsvtGSGM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.17|      17|      18|    1121|    1137|      10
---------------------------------------------------------------------------
 1121- 1137 (35.84/23.66)	QIQEIYCMPPGHEHQHQ
 1142- 1158 (24.33/12.68)	RLQERLNLLQQHEVNDQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.43|      14|      71|    1101|    1115|      11
---------------------------------------------------------------------------
 1101- 1115 (26.71/20.34)	PGMYPPYPmLHQQEI
 1173- 1186 (30.71/17.94)	PPMYGSNP.LHNQQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     348.39|      90|     106|    4452|    4543|      12
---------------------------------------------------------------------------
 4309- 4368 (33.42/ 7.11)	................................................QDFSM.PSKKSSVHAALSSAFPSMGSKSKLddtlnklmkknncTIEEP..VigkeKKRKKLDE
 4452- 4543 (142.62/63.18)	GAAGGSGLSALQNMAMGGLSSKDSLNAllAQTMATDPQTFLKQ.QQKMMQFLP.PAQRKAYENMLAEMEQAMKLSSKY.............SANSPHDV....KVNKWLSD
 4560- 4628 (115.93/46.75)	GGAGSSSANSRRSNRQQSSSSQQSPSA..AQLQKQQQQQ..QQ.QQQQQQ..................QQSMAGPQNL.............TGEEPVPV.....INKQ.TG
 4629- 4679 (56.41/18.42)	KRLGGNKAPQLKRL.MQWLTENPNYE........VDPK.WLEQmQNPMSAPSPkPSSMDSY..................................................
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     221.48|      27|      47|     461|     487|      13
---------------------------------------------------------------------------
   72-   97 (37.17/12.56)	GLGAADHQAAMGLGVGVGVGVG.VGV...G
  218-  240 (31.63/ 9.40)	.LPQHYPQAPGQHPLYPGVGA..PAV....
  243-  264 (42.02/15.33)	GQP.PTPQGYAHSPY....GSP.MQHQ..P
  265-  281 (26.18/ 6.28)	GRGAPQH...........VGYGhSGLD..P
  461-  487 (48.76/19.18)	GLPSPRPQPPSSGAVGGAVGSG.SKVP..P
  510-  532 (35.72/11.73)	GLP.PMDYP...SAYRSAV..G.PRMPasP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     131.73|      33|      34|    1420|    1452|      14
---------------------------------------------------------------------------
 1420- 1452 (54.36/33.14)	EAGDETVDSVP......DSAG..DAASTPSRRDRKRSTARS
 1455- 1489 (45.42/26.04)	NANSEEGGSAR......RNRGslSAKALKKRRNRGRIVPES
 1490- 1523 (31.95/15.34)	DGEDDTLDRTPppspppDSEL..DSNKRRSSRNTQR.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     102.89|      25|      25|    2501|    2525|      15
---------------------------------------------------------------------------
 2501- 2521 (25.82/14.05)	.....DGN.NKQLSKKEIEDL..........LKKGAY
 2522- 2548 (28.16/16.16)	GAVMdDDNaGDKFCEEDIDSI..........LKRRTQ
 2590- 2620 (18.17/ 7.11)	.....DID.PDACERDETEDLvlseprrrtqIKRYGH
 2621- 2642 (30.75/18.51)	EDVM.EIN.SED.SSNENSD............EEGGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.91|      17|      23|    1995|    2015|      16
---------------------------------------------------------------------------
 1959- 1990 (24.53/ 7.64)	WKS..LPYEdctweleedvdndkiEQYLRFNKIP
 1995- 2013 (31.38/19.72)	WKSkkRPHP...............EQWKKLEKTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     100.03|      26|      58|    4030|    4055|      17
---------------------------------------------------------------------------
 4030- 4055 (43.43/25.08)	VDSKY.................SAFASCKGVTDLSIALHESIP
 4090- 4112 (36.49/19.54)	VAS...................SAAAS.SGATGLSQSLSQSKP
 4113- 4151 (20.11/ 6.46)	VSASTlplldanninaavaaavAAAAAGGNATSLS.SL...LP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     387.01|     139|     200|    2044|    2194|      18
---------------------------------------------------------------------------
 2024- 2074 (48.02/38.43)	.......................................................................................................Y...QLEGLNW..........LK...........................FSWYNTHNCILaDEMGLGKTIQSLTFvhS.....VYEYG.IRGPFLV
 2075- 2228 (215.37/189.18)	IAP.........LSTIpnWQREFEGWTDMNVVVYHGSVTS..............KQMIQDY.........EFYYKTETGKvlkEPIKF..NVLITTFEMIVTDYM..DLKAFNWRLCVIDEAHRLKnrnC.KLLEG...LRQLNLEH...RVlLSGTPLQNNIS.ELFSLLNFLEPSQF..SsqeefMSEFGsLRTEEEV
 2251- 2401 (123.63/87.22)	LAPkeetiieveLTNI..QKKYYRGILEQNFSFLKKGTTSanipnlmntmmelrKCCIHPYllngaeeqiQYDFKAQHGE...DPESYykNLILSAGKMVLIDKLlpKLKANGHRVLIFSQMVR.....ClDILEDylvYRKYPFERidgRI..RGNLRQEAI.....................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      11|      23|    2677|    2688|      19
---------------------------------------------------------------------------
 2677- 2687 (20.54/ 7.34)	GLEEIQYGNWA
 2718- 2728 (18.46/11.60)	GWRDIDIEDCA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.87|      59|      71|    2832|    2898|      21
---------------------------------------------------------------------------
 2832- 2898 (82.28/77.86)	PTSIHD..PNHWSKKEKYDaDAYLEGAYkKHlGRHANKVLLRVRMLYYIQHevIG.....DLvqQIKdNTPISE
 2903- 2968 (105.59/65.90)	PPPTPDqvPSSWWNPICCD.KSLLVGTY.KH.GCEMYRQMRADPNLCFVTH..VGagagdDL..AVT.NLPINE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.82|      13|      62|    5091|    5110|      23
---------------------------------------------------------------------------
 5091- 5110 (17.92/ 7.25)	LPGTSSsasggggGGSTSSS
 5155- 5170 (18.90/ 8.28)	MPSTSS....sntATSSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.90|      13|      45|    2691|    2703|      24
---------------------------------------------------------------------------
 2691- 2703 (26.44/17.82)	CFKVEKG...LLSFGW
 2735- 2750 (21.46/12.99)	CLQVYKGdekIKTFIW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.77|      28|      33|    5530|    5557|      25
---------------------------------------------------------------------------
 5530- 5557 (48.83/21.23)	SNRLKRPRSGNEQGS..VSAEGQPP.EKRRE
 5558- 5588 (35.94/13.54)	LRSTRHTRSSADANSlnLSAGSESGaEERNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.63|      29|      33|    1204|    1235|      26
---------------------------------------------------------------------------
 1204- 1235 (43.68/25.79)	ANKPRK.PRAKKGEKVAAVGQDLMDISsnvVVG
 1237- 1266 (45.95/20.86)	ANATQSiPTTQLPVSEDCVTQGAGDTS...VVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.78|      13|      64|    3578|    3599|      27
---------------------------------------------------------------------------
 3578- 3595 (13.63/32.31)	LREvarnPQLEDRlKLCT
 3603- 3615 (27.15/12.64)	WWE....PGRHDK.ELIT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.77|      12|      24|    4189|    4200|      30
---------------------------------------------------------------------------
 4189- 4200 (20.36/12.70)	DVETERAKLHAL
 4210- 4221 (22.40/14.87)	DWESEIANMEAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.88|      13|      32|    1003|    1015|      32
---------------------------------------------------------------------------
 1003- 1015 (21.04/13.21)	ETSLSTELPAVQE
 1038- 1050 (20.84/12.99)	NTSLSEDAKSADE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.61|      15|     165|    4245|    4259|      33
---------------------------------------------------------------------------
 4245- 4259 (28.30/15.41)	PAHQHASLSRQSSGQ
 4403- 4417 (27.31/14.49)	PANLQSSSSQQQSNQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.16|      15|      65|    1856|    1872|      38
---------------------------------------------------------------------------
 1663- 1677 (24.26/12.24)	EKPKEKTPEPK..EEKE
 1857- 1873 (20.90/17.17)	EAEKENKPEPVyiDVEE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05442 with Med12 domain of Kingdom Metazoa
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