<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05426

Description Serine/threonine-protein kinase SSN3
SequenceMPLRPRHGVAFPAHAYQQRHIDSHDRTPGYQPKVRITDRYRIVGFISSGTYGRVYKAVGRGGKPPGEFAIKKFKPDKEGEQISYTGISQSAIREMSLCSELSHGNVIRLCEIMLEDKCIYMIFEYAEHDLLQIIHHHTQQPRHPIPPATVKSIMFQLLNGCQYLHTNWILHRDLKPANIMVTSSGEVKIGDLGLARRFDKPLHSLFSGDKVVVTIWYRAPELILGSYHYTPAIDMWAIGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIVEIMGVPTKDRWPLLPTMPEYSQLNTLANSMGSGHHHHSHHNHHHGHYGGRGQHPPSSSNLEKWYYSTISHSPGSNGAAPLASLGAEGYKLLVGLLEYDPSKRLTAAAALQSPFFSTGDRVSANCFEGIKNEYPHRRVSQDDNDIRTSSVPGTKRSGLQDDSLRPSKRVKD
Length446
PositionKinase
OrganismNeonectria ditissima
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Neonectria.
Aromaticity0.09
Grand average of hydropathy-0.514
Instability index43.52
Isoelectric point9.27
Molecular weight50238.70
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05426
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     175.23|      57|     141|     203|     286|       1
---------------------------------------------------------------------------
  221-  283 (90.48/87.22)	ELILGSYHYTPAIDMWAIgcifAELLSlrPIFK.GEEAKMDS....KKTVPFQR.NQMQKIVEIMGVPT
  365-  427 (84.75/37.95)	KLLVGLLEYDPSKRLTAA....AALQS..PFFStGDRVSANCfegiKNEYPHRRvSQDDNDIRTSSVPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.57|      14|     140|      60|      84|       5
---------------------------------------------------------------------------
   60-   73 (26.54/28.01)	RGGKPPGEFAIKKF
  326-  339 (28.02/ 7.54)	RGQHPPSSSNLEKW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05426 with CDK8 domain of Kingdom Fungi
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