Description | Os10g0548400 protein (Fragment) |
Sequence | SGPRICGPRGIFFFLTLLVWEFDTVTSRGQVGGESRRRRRWSVSGRSRRRRGEMEATVDELSEAYQEFVAAAAAVVEARGQSGGEKNAATDAALEAFKQRWELFRVACDHAEELVESIRQRIGSECLVDEATGASSSSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQHGAGGASAAGPGGGGGAAAAASGVAGQHGHGGVDTRFPEDGAQ |
Length | 213 |
Position | Tail |
Organism | Oryza sativa subsp. japonica (Rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.262 |
Instability index | 63.03 |
Isoelectric point | 6.44 |
Molecular weight | 22294.54 |
Publications | PubMed=16100779 PubMed=24280374 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | cold acclimation GO:0009631 IEA:InterPro leaf senescence GO:0010150 IEA:InterPro regulation of transcription, DNA-templated GO:0006355 IEA:InterPro root development GO:0048364 IEA:InterPro |
Binary Interactions |
Repeats | >MDP05389 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 99.77| 24| 114| 70| 93| 1 --------------------------------------------------------------------------- 25- 42 (24.40/ 9.66) ........VTSRGQVGGESRRRRRWS 70- 93 (39.01/19.50) AAAAA..VVEARGQSGGEKNAATDAA 187- 212 (36.36/17.72) AAAAAsgVAGQHGHGGVDTRFPEDGA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.89| 18| 35| 127| 146| 2 --------------------------------------------------------------------------- 127- 146 (25.48/16.42) LVDEATGASSSSSAalAAPG 165- 182 (32.41/15.81) LVIELQHGAGGASA..AGPG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AAAAASGVAGQHGH 2) VDTRFPE | 187 203 | 200 209 |
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