<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05388

Description Os10g0548300 protein
SequenceMQRAHSYCNIWFICNGKLTCVREASCCPVKRSKSARLPSSVDSCKVDLQSLLEPNIEAKRLGCMYINEMELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKANRLQDLNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDDAVKEARSMRIEKELTNSCAYGAISSEFSLMELEQATQNFSNALNIGQGGFGSVYKGSLRNTTVAIKMLSTDSLHGQSQFHQEVAILSRVRHPNLVTLIGACTEASALVYELLPNGSLEDRLNCVDNTPPLTWQVRIQIITEICSALIFLHKHRPHPVVHGDLKPGNILLDANLQSKLSDFGISRLLLESSVTGSDAHYTSRPMGTPAYMDPEFFATGELTPQSDTYSFGVTIMRLLTGRAPLRLIRTVREALNDYDLQSVLDHSAGDWPLVHVEQLAHIALQCTELSKQRRPDLEHDVWEVIEPMKKEAHSPLSQSFRSICSAIETATPSYFLCPISQVTMRDPQMAADGFTYEADAIRDWLDKGHDRSPVTNQTLANCDTIPNIALRSAIQEYLKQNNMNKSFALYEQQH
Length576
PositionTail
OrganismOryza sativa subsp. japonica (Rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
Aromaticity0.06
Grand average of hydropathy-0.414
Instability index55.09
Isoelectric point5.91
Molecular weight65080.20
Publications
PubMed=16100779
PubMed=24280374

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05388
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.75|      28|     469|       2|      29|       2
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    2-   29 (57.03/41.46)	QRAHSYCNIWF..ICNGKLTCVREASCCPV
  472-  501 (46.72/32.64)	KEAHSPLSQSFrsICSAIETATPSYFLCPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     164.18|      51|     225|      90|     142|       3
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   90-  142 (83.40/64.02)	KH.ATMVLQNDLDWLKYQLNEK.ANRLQDLNQQKHLLEHRISESDsvATYLEESM
  316-  368 (80.78/55.78)	KHrPHPVVHGDLKPGNILLDANlQSKLSDFGISRLLLESSVTGSD..AHYTSRPM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05388 with Med32 domain of Kingdom Viridiplantae
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