<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05342

Description Uncharacterized protein
SequenceMASCLIACEKKFLKRPKLGPPDCYPQDAKQGEDELTAEKVRQGYLFKTPLSCEYESARSAKFDESLDDIMGKVLQSHNAIATRKAELNALQDAGRKKAGFKEPSIWHLAAKPKAQDAWFKDLSGNKPLVILGKRFPFLNKREEILTTLAEVNVSIGRAVWFLKMTNAQIAQQQECGKMKKKQVNDPYADWAQLVLKYLRDLITKLSDHYALTTDCSINVEVENAYRHWQYATKLSRYMFEEGLFDKEVFLNGILDIFSEKACDGEIGLLKLIVPLVLQLIDGFLSSVILSRRLGYLACKVLASLYCSGVEGSGSDIRKNWNSEHLNCQFHRTVLLGLSAVVHAILIDCSTAFVWNEMKTDDVGFNSKAYLCGSPLDILPCNPSELPMVADSSSELVRKRLESLQSHVRERSGVVESHWSFSKSERTGLSTIIQHLLTILDCLDTFKFEYVDETNHIGALYAKVFSSEAKDMEDQDPIVVRFLCHWAVTDHRYGSHRALVVTLLLSKRQAAYRKASSIPQYPFQAALFQYLENEAPNLGEMCSSFNIRQFTNLILLFSHLIQSNIFSHDQYVSMLVSSGVLKSGSCSLNSSVAPGVATPCANAIPPMPVIDDFKQFDSMDFNVLRESDDARLDLDKIVAMQEKHSAQVESEPSVRKTGTKLSKHYFNVLHFPLPQDEQYRHDCNQRQLLIFGLTADRDCRRHVLKKITKELNKLWCKKASVEFSQVAPPRIKKVFDSESLCLLSRKMQNLVFFDQHAVTDSCCDTCIEHLSDFACGYTNYLPTVENLDFFLSLLEESCNFFSMIEFIEAIVAILPRLEAQILERRLDGADSITLHYALCIVGYLRKHHCYLIQLESVICNIWRCLFLYIKSKTVLSSFSAERCIWIYIHDLYECCTFIRASHSDLYLNSRERIQRYLCFEAKPSCCSDVRGLLTDFQHDNMLNALFESPNLIIEPNLIQRLLENANFRYVFAVSAFKAVCKVSFESERLFQIVHFCTDVTALCPNLNADWIAILRVLCFPTCMGQDKCYYESLLEVDVSNTAIYPSLAVLVTSLLRRLCFRLEDFTLHVAFPALLPFWKHPESPKVEDAFEASAKLTLYILGKIFYFDFFGTFINQRKALSARTKGELYLMYSSADGMVPESILTLLISVLMLDDSNGNDVKTPSALKDILDTSKALQSDSCTADEQLSVMARDLLEQICKQEWIKRKFLHSTGLFDTKRLLNPLVNHSQAQRLLRMIMRSESEKTLMHQFELCSTKRELVSRILENLTIMNLWVSQTDLQLLLKQVQNLQNESLHVIDTIAKAVMEVFQPQTSSEGKEENSLMFDTSFDEIPPFWLMASLVARLPTFVQGRVLKAAASILENYQARRERNLLAQSSSLLGQQPFLSLLSTCLKGQDDQREGLLCSLLKQVQEFVLRVKEDPYVLCDSAVAHEMYGALQLRLGLVGSMFDMVCKSSHLENWALLSMQLILYGIVTEKGNRKLFFSCVDFLCILLLSCLMPDSASFSFSGQERSNDDCRRIYNNVIKKLKKELGDRYFSSMKYVYQLLPIPRHTLDVIVCDAYGSQPQKSSKSGSSSSLVTFSSNDVVQRKGLQIVSKEKLNPWEVIEGYSRENNGLRWSWFQGVKLDIQPETLLQQMLRMLPHEHHNALNRPPMPGELRSNPFLEALQVHYNPSSSDTAGMDKLPNAKASVSGIVGLSQEFTGQLQTPRTTKGRAKKASTRGRKNSRAAAAAAAAINSPMVVGRPMNVSQMQVNAVGPYGYYPQQMPVGNSPAMSGFGGGQPMGSYQTRNFANAPMQSMPSSSGKQAISAMIRGRQPSGSSGQQIVMAGAPPNHVGGPVSSNLGYVAQPMNSMGSDANYNPSLQHMQMQMDSQRQQQMMQESMMDQQVRPALQRTMVVQQQAPQHAMTPQMAQPGPYPGYSSFPNGMTTRMPMNGPQQRDNYAQMQNFSATTNYGNQYYQQQNGNGPVRMVQPDLIGSGSVRYGQPNVLPPNYQMQNQQMRPAAPYQQPAPAYPSGQQQYQSPNQALPVYQGQRLSQYGNAPGQEFNQNQQINYYPAQY
Length2058
PositionKinase
OrganismTrichuris muris (Mouse whipworm)
KingdomMetazoa
Lineage
Aromaticity0.09
Grand average of hydropathy-0.238
Instability index47.13
Isoelectric point7.84
Molecular weight232291.07
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05342
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      98.06|      22|      36|    1736|    1757|       1
---------------------------------------------------------------------------
 1736- 1752 (26.06/11.31)	................NSPM...VV....GRPMNVSQMQV
 1753- 1789 (26.26/11.46)	NAVGPygyypqqmpvgNSPA...MSgfggGQPMGSYQTRN
 1911- 1930 (20.18/ 6.88)	AQPGP...............ypgYS....SFPNGMT.TRM
 1997- 2021 (25.56/10.94)	QQMRP.......aapyQQP....AP....AYPSGQQQYQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.19|      20|      22|    1255|    1274|       2
---------------------------------------------------------------------------
 1200- 1216 (21.83/11.62)	.KQEWIKRKF..LHSTGLFD
 1255- 1274 (32.17/21.03)	TKRELVSRILENLTIMNLWV
 1277- 1296 (26.18/15.58)	TDLQLLLKQVQNLQNESLHV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     399.47|      96|     163|     739|     838|       3
---------------------------------------------------------------------------
  739-  838 (158.05/118.93)	LCLLSR.KMQNLVFFDQHAvtdSCC..DTC.IEHLSDFACG.YTNYLPTVENL....DFFLSLLEESCNF...FSMIEFI..EAIVAILP...RLEAQILERRLDGADSITLhYALC
  904- 1002 (131.58/87.13)	LYLNSReRIQRYLCFEAKP...SCC..SDV.RGLLTDFQHDnMLNALFESPNLiiepNLIQRLLENA.NFryvFAVSAF...KAVCKV.....SFESERLFQIVHFCTDVT...ALC
 1010- 1100 (109.84/71.32)	IAIL......RVLCFP......TCMgqDKCyYESLLEVDVS.NTAIYPSLAVL......VTSLLRRLC.....FRLEDFTlhVAFPALLPfwkHPESPKVEDAFEASAKLTL.YIL.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.41|      18|     157|    1811|    1833|       4
---------------------------------------------------------------------------
 1811- 1831 (29.94/27.85)	IRGRQPSGSSGQQivmAGAPP
 1843- 1860 (34.47/16.08)	GYVAQPMNSMGSD...ANYNP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.88|      24|      64|     354|     417|       5
---------------------------------------------------------------------------
  354-  380 (41.34/82.16)	WNEMKTDDVGFNSkayLCGSPLDILPC
  418-  441 (42.54/ 9.73)	WSFSKSERTGLST...IIQHLLTILDC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.60|      21|     262|    1297|    1329|       6
---------------------------------------------------------------------------
 1309- 1329 (38.30/41.22)	QPQTSSEGKEENSLMFDTSFD
 1564- 1584 (36.30/14.59)	QPQKSSKSGSSSSLVTFSSND
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.91|      12|      23|    1874|    1885|       7
---------------------------------------------------------------------------
 1874- 1885 (23.92/13.27)	QQQMMQESMMDQ
 1898- 1909 (23.99/13.33)	QQQAPQHAMTPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.91|      11|      36|    1985|    1995|       8
---------------------------------------------------------------------------
 1985- 1995 (23.61/13.23)	PNVLPPNYQMQ
 2022- 2032 (22.30/12.06)	PNQALPVYQGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.57|      11|     262|     304|     314|       9
---------------------------------------------------------------------------
  304-  314 (22.24/10.72)	LYCSGVEGSGS
  574-  584 (19.34/ 8.50)	LVSSGVLKSGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.81|      21|     262|    1415|    1445|      15
---------------------------------------------------------------------------
 1423- 1445 (33.37/41.25)	VLCDSavAH.EMYGALQLRLGLVG
 1450- 1471 (33.44/14.43)	MVCKS..SHlENWALLSMQLILYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.53|      18|      22|    1154|    1171|      26
---------------------------------------------------------------------------
 1151- 1168 (30.79/22.82)	MLD.......DSNGNDVKTPSALKD
 1169- 1193 (23.74/15.50)	ILDtskalqsDSCTADEQLSVMARD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05342 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGPVSSNLGYVAQPMNSMGSDANYNPSLQHMQMQMDSQRQQQMMQESMMDQQVRPALQRTMVVQQQAPQHAMTPQMAQPGPYPGYSSFPNGMTTRMPMNGPQQRDNYAQMQNFSATTNYGNQYYQQQNGNGPVRMVQPDLIGSGSVRYGQPNVLPPNYQMQNQQMRPAAPYQQPAPAYPSGQQQYQSPNQALPVYQGQRLSQYGNAPGQEFNQNQQIN
2) NSPAMSGFGGGQPMGSYQTRNFANAPMQSMPSSSGKQAISAMIRGRQPSGSSGQQIVMAGAPPNH
3) SQEFTGQLQTPRTTKGRAKKASTRGRKNSRAAAAAAAAI
1835
1769
1697
2052
1833
1735










Molecular Recognition Features






MoRF SequenceStartStop




NANANA