<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05238
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MLLLYIFLLIPISSIHETIKKSCFEHYVLFVCDKSQFIGFYENEQLSIIDVFYNNNYEADERTFVTVTGQGSYAETNHFEVVKPNDENSLNNQILNIIKMPKRNGTITYHTILVDMIHTVDLSDIKIFTNYPTIVLFIGSELQDIKKTKIVLKMLELESLNNLKILSIVFNNQYMKIAKFLTDDINDNFLYNVTDQKRYDKVNKWILEKICYESGEVTTVTTTPTFISTITHSPSTFTTSQKPKKCNNYLIFAIDTTSNILNIDEFTFMKTTLEYNVSLLITDIKKVAIDSFDIKYNRRYNFNDIKTVEEFMMNIYIIKQRNDSSLSLLFKRMNTLHIPHDSTLSTFIFIAQNDKKEIEKSVVDGKILKNKGSLNFIMMKSNITRDDLSLLHPSNTFRWNLTSSIMSDDSNYSDDSSSDTKDEGGKYISNDKLSGGLKRKWNSEGGDSKNRNMKDMELEELLSDLPVVSHQQHNHGMIPFGMLLQFASHKISQELIVLSELIPKAYDQSKKISLVEFSFVTMNLFSKILAIVKWYTYFKKYRLCTPIQNFLDLQSQIFRDTADALCGIARVELAGARLPYFEMQAALNNIWGEHNILPLAIKKRFVPDPPISSGEQPIILSKLNQVLKNRLSLISSKIPVSITEITIKNGTATFKVIGEYEVTLTLLSAEVAAKWTILHIKILVEQHDIGYGTQLVHPLQLHNIHQHLQRLMYESKNPINTMHDFMHKFCLSLQLDVLYCEATQLTRKQYFRKLLIEKYDIEKGELLICYWPNFDDKKRVYPSEYKIRISHSKSPSYRGLRVYHIPYRAGMPQLDTNTGRLSLCTLINTSSSIRANDKLLALKQKLSIVNPMAGSYISGCSIRTIIFPLIEDSKLLDDEYLTFKVNLYTGAYHCSSSFLKPLKNIKELNDALNGIGSIKQIRELINEIRVNLFMEKYSAIIKIHYLIISEITLPEKARKYFSEIKDAKLCVRFHHDLPYYCVFVFVKDTDCSIVISQYTIFKNCRGDFVITPFMYESKKCHANVAKNNVEEVYDVNDYHPIIHFEDEIKDLILTMDMSIRHKRLEEDFMRKGVSLDEFNIKQPYGDTVVNIVNIPSIPLNDSAFFRTIVKIRMLCDNRIKVLWPFECTVRNVPIISDFFEYTSSDEFPVYLYGKKNLYILNRSSSSLYVTNANIDIVSTNFIEKMTTFAMMYKQIEHFSHSYYNFYRRYCNIKFFSFHKLVIAYGKDRDQLMYLTYKPSRKQYLISFGQDNTRKFSLGYDSNEPSNFTNYINAHNIVSYKLSEMTKKNYFLTELIHYLVNTSDTLTHLYRSIKPVIKSTEIFGQISREMVFFTQEYQLELYCQSEYFFKIVTGTISLGIFIYDSNSVFLKDCSYGEPMLVGLERFIKTQTDGVRVESLFKMTSSERNNYYGASRRVFRLPSIAFKKLTVPHSVEKNYSVLGKYIANIRAFDKLRIIFTQRKEKTIFKGCNIRINHVQRTSYYIKVIYQGAQLPKQINPPTIHFTVYLEPNTFNIKAKIEYDGSIKPPVEAIKKIEEYFEKTLSHGNCPQGVYSFMNILRLTYPTFFSNIAALMNWELNPQPTHFYRLKLDLISNDHRNPDNTVQYSPSFLIEEKSFRVLVPITLRPQKLQKNKNVDSSRIKLNAVWDINKNSFFVHKPSTDLLKSINDKITKQNELTKDSKDCNIESCVRIILTNNFEKLETQK |
Length | 1704 |
Position | Tail |
Organism | Parastrongyloides trichosuri (Possum-specific nematode worm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida>
Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Strongyloididae>
Parastrongyloides.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.248 |
Instability index | 40.03 |
Isoelectric point | 8.89 |
Molecular weight | 198349.61 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05238
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 556.38| 178| 351| 541| 888| 1
---------------------------------------------------------------------------
693- 887 (287.06/354.25) TQLVHplQLHNIHQHLQRLMYESKNPINTMHDF......MHKFCLSLQLDvLYCEAtqltrkQYFRK.......LLIEKY........DIEKGELLICYWPNF....DDKKRVypsEYKIRISHSKSPSYRGL..RVYHIPYRAGMPQLDTNTGRLSLCTLINTSSSIRANDKLlalkqKLSIVNPMAGSYISGCSIR...........TIIFPLIEDSKLLDDEYLTFKVNL
1292- 1507 (269.33/108.53) TELIH..YLVNTSDTLTHLYRSIKPVIKSTEIFgqisreMVFFTQEYQLE.LYCQS......EYFFKivtgtisLGIFIYdsnsvflkDCSYGEPMLVGLERFiktqTDGVRV...ESLFKMTSSERNNYYGAsrRVFRLPSIAFKKLTVPHSVEKNYSVLGKYIANIRAFDKL.....RIIFTQRKEKTIFKGCNIRinhvqrtsyyiKVIYQGAQLPKQINPPTIHFTVYL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.99| 16| 19| 109| 126| 2
---------------------------------------------------------------------------
109- 126 (24.40/21.53) YHTILvdMIHTVDLSDIK
131- 146 (28.59/17.89) YPTIV..LFIGSELQDIK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.88| 37| 233| 968| 1045| 4
---------------------------------------------------------------------------
167- 205 (59.53/24.24) SIVFnNQYMKIAKFLTDDINDNFLY.......NVTD...QKRYDkVNKW
992- 1038 (56.35/10.94) SIVI.SQYTIFKNCRGDFVITPFMYeskkchaNVAKnnvEEVYD.VNDY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.95| 15| 20| 1222| 1236| 5
---------------------------------------------------------------------------
1222- 1236 (27.64/19.33) IAYGKDRDQLMYLTY
1245- 1259 (27.31/19.00) ISFGQDNTRKFSLGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.26| 17| 19| 274| 292| 7
---------------------------------------------------------------------------
274- 292 (24.10/17.23) EYNVSLLITDIKkvAIDSF
295- 311 (31.15/16.58) KYNRRYNFNDIK..TVEEF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.08| 18| 19| 407| 425| 10
---------------------------------------------------------------------------
407- 425 (27.47/22.62) SDDsNYSDDSSSDTKDEGG
429- 446 (32.61/21.80) SND.KLSGGLKRKWNSEGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.59| 11| 19| 1188| 1198| 11
---------------------------------------------------------------------------
1188- 1198 (21.74/12.25) FAMMYKQIEHF
1205- 1215 (22.85/13.28) FYRRYCNIKFF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.86| 20| 20| 918| 937| 13
---------------------------------------------------------------------------
918- 937 (34.10/24.32) IKQIREL.INEIRVNLFMEKY
940- 960 (29.75/20.13) IIKIHYLiISEITLPEKARKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 156.65| 52| 467| 1047| 1108| 14
---------------------------------------------------------------------------
1047- 1108 (65.60/88.37) EIKDLIlTMDMSIRH.....KRLEEDFmRKGVSldEFNIkqPYGdtVVNIVNIpsIPLNDSAFFRTI
1513- 1569 (91.05/69.84) NIKAKI.EYDGSIKPpveaiKKIEEYF.EKTLS..HGNC..PQG..VYSFMNI..LRLTYPTFFSNI
---------------------------------------------------------------------------
|