<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05223
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MNDLSQQATVTLSQTPELSNNDLMANENGETMPFGMLLQFMCHKISQELIVISELLPKYTDYNRKITITEFTYMARCLASKILAIVRWLKNYSKHDMCKRIQSFLDSQSQMFRDTADALCTIARNELVFARVPMYEVSTSVALSYGENIKIPIAIKKRFVPEEKISKAERNNILSIINGNIKSRLSLISSLIPPNIQNIRVKNGIVTLVVPGEFELSLTLLNNDANTKWTLLDIKVLVEQYEIGYGTKLVHPMQLYQIHQYLQQMIVHSKNPINDLYKYMHDFSTSLQLDVLFCESSQLASNQLRNKIIIEKYSQETGELVISYWLILKDKKQYVPSQYKIRICKDKNKPNNKLLVRHYPYIRGAPTLNFNTGRLSMSKLLCEISSMRIVEKLKELKTKLLKIKPLCECIFHDDLHPYISFNLLPSNNMNEDSIMNIYVNTFTGNVTCQMYEDDKNVQVFNDKINRNCNNIDELSVIIRDIKISILMKRYRKIVEKYNLFECSNLVVEEAQSIIHSNHCIVTMLGKKNNESLIFSIKTLDDNNLKINFYICKIANDMCLVRKYNPSNDIMNKRPETIDDILIGMTKNEINKNSINEEKTTDSNLITNFQYLESTFNAFINEYMICKVFSRFCNLPDGNAHFNGKRSTGIGAFTNLFTKNSKAEVYKFGKMALSIVDLWTNDIGPYNIYAVTFDIYNTPVKVDFYKRDRNDNHVVLLNGTNKTFVNFKCYKPWIHPFKIFENISESMRLKRHFNFVIYKAMKNFSHYYYKYFKSFCNIKAYTNGSVTIAYGENRNYLLFLSTCKKNIPYALRFGIDSTKSFVNGDNYKGGEEFIKALNPHMYFIHHLEKYFKNEFFMIFLMKYILKTLNSFLIIFNMPVPRCFLGIYSYEFTSMNNKMEIIAPSKISIYDEFTIRLLLGNSTLEIFVGDEDCIYITDGSCQDKKIPGLHSLILTYSYHKKSFNKPFFDYTNEELESFFEIKNMRYKINYSTLRKLCYDIDGENKYPVLPRSHLILRSLAIMILIPMTFMEQLSEVSYL |
Length | 1037 |
Position | Tail |
Organism | Parastrongyloides trichosuri (Possum-specific nematode worm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida>
Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Strongyloididae>
Parastrongyloides.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.219 |
Instability index | 37.51 |
Isoelectric point | 8.91 |
Molecular weight | 121095.25 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05223
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.25| 19| 32| 170| 188| 1
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170- 188 (30.21/18.66) RNNILS.IINGNIKSRLSLI
202- 221 (26.04/15.06) KNGIVTlVVPGEFELSLTLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 190.13| 59| 71| 526| 587| 2
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526- 587 (101.14/70.33) KKNNES.LIFSIKTLDDN.NLKINFY.ICKIANDMClvrKYNPSNDIMN.KRPETIDDILIGMTKN
597- 659 (88.99/54.70) EKTTDSnLITNFQYLESTfNAFINEYmICKVFSRFC...NLPDGNAHFNgKRSTGIGAFTNLFTKN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.22| 10| 76| 763| 772| 3
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763- 772 (22.33/12.87) FSHYYYKYFK
842- 851 (20.89/11.57) FIHHLEKYFK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.54| 42| 75| 235| 276| 4
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233- 274 (74.85/44.05) DI..............................KVLVEQYEIGYGTKLV.HPMQLYQIHQYLQQM....IVHSKN.PIN
275- 352 (43.69/22.95) DLykymhdfstslqldvlfcessqlasnqlrnKIIIEKYSQETGELVIsYWLILKDKKQYVPSQykirICKDKNkPNN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 190.74| 57| 66| 886| 948| 5
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886- 948 (90.78/79.04) YSYEFTSMNNKMEIIAPSKI.SIYDEFTIRLLLGNSTLEIFvgdedCiYITDGSCQDKKIPGLH
954- 1011 (99.96/69.47) YSYHKKSFNKPFFDYTNEELeSFFEIKNMRYKINYSTLRKL.....C.YDIDGENKYPVLPRSH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.76| 30| 296| 54| 83| 6
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40- 72 (45.35/28.79) FMCHKISQELIvisELLPKYTDYNRKITITEF....T
73- 109 (42.41/26.42) YMARCLASKILaivRWLKNYSKHDMCKRIQSFldsqS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.30| 23| 38| 407| 431| 7
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407- 431 (35.57/30.95) CEcIFHDDLHPYIsFNLLPSNNMNE
448- 470 (43.73/26.64) CQ.MYEDDKNVQV.FNDKINRNCNN
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