<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05205
Description |
Uncharacterized protein |
Sequence | MDDGDHGKPALPVVPDKCGPPTINLNYLLDFAIQQIYHEITVLSELLPKKLDGDRKISLVQFAHSTRMLFVKLLAVVKWVKSSKKFESCSAICYLLDQQSQYFVETADRLVTISREELVMARLPAFQVTAAVDVLTQGTYQHLPTIIQDRFVLKPKISSIDEANVLLRLNQLILTVPGEFEVNLTVLGEREQTPWTLLNIKMLVEDYEIGYGAQLVHPLQLHMLHNVLQSRMDVAKNPINEVYNFLHTFAQSLQLDVLFCQASQLAAGRLRNKIVIEKYDPKERVLVIGYWVQRITRKGFGNHVRLVPQYRVTIFGDGNDDTSLKVRHHPIAPDLGQLDDRTGRLSIDRLLSETFVVRCRERLLRIRKRLKAAKPLSIVLYAGTAAPCLWLPLLRDSVDSREECVVVSVNMFSGRVLCSLDAIEFLPGSSSELKDLEAALYDGQSIDTLRKRIDRLKVLLMIERYRRSVSTLQVRIVNENQMAPFFKKVHSLPGDRICLQFIKEEHFYLVITFVSSENLTVKMNLYLLCTLDDKLTTAVAAVDDRISFMRVCEELDKKRIGYRSVEEEPQVGGLILHITDVSAVVDVRCAAFLRNMARCCLRLDSRARVVWPLECCMVNIPLVRDLSPYKKGRKTGISVGGPVDTIATSIIERLTRYSHIYDTVNRFAKAYDAHYNKFCSVQAYTFHKLVIAYGRERDQQLITLPISIYDSPEVNLQEATRWNAHCMMATILKDKFNAKSDLTELIHYLVTTSEPLQSLSFFSRIRFQSCKVLAQLFNMDIPYPLMLKVRISVPVVVPPQTQRTDTSAPQTPQQIGGVVSFNFHLDPNGLNLKLNVEYSRNSPSPSDIATLERYFELVVCRLNNELAVMSFMNLCRIVANGAISGIAHVMNAQMDPSPSTYWNVSIQLACLGRDQTNTNVRRYQFGTAFDGNNINALLLICFRPSRASSPRSNEKHVLRILYNMQTNTVKQHGSDDEAMSSIMMACSQEAARTGECPLWPAIRQCLDK |
Length | 1008 |
Position | Tail |
Organism | Nippostrongylus brasiliensis (Rat hookworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Strongylida>
Trichostrongyloidea> Heligmonellidae> Nippostrongylinae> Nippostrongylus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.066 |
Instability index | 45.16 |
Isoelectric point | 8.73 |
Molecular weight | 114458.52 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP05205
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 179.23| 48| 48| 894| 941| 1
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873- 897 (29.51/16.23) .....................NLCRIVANGAISG..IAHVMNAQMDPS
898- 945 (87.29/63.18) PSTYWNVSIQLACLGRDQTNTNVRRYQFGTAFDGNNINALLLICFRPS
948- 986 (62.43/42.98) SSPRSNEKHVLRILYNMQTNT.VK..QHGS..DDEAMSSIMMAC....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.95| 16| 48| 660| 679| 2
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660- 679 (26.70/27.56) IYDT..VN.RFAKAYDAHynkfC
708- 726 (24.25/13.55) IYDSpeVNlQEATRWNAH....C
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.32| 17| 606| 382| 399| 4
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382- 399 (28.57/19.43) AGTAAPC.LWlPLLRDSVD
990- 1007 (29.74/15.83) AARTGECpLW.PAIRQCLD
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